Information for 11-GAARCTMGAGTTT (Motif 12)

T C A G C G T A C G T A C T G A A G T C A C G T G T A C A C T G C G T A A C T G A G C T A C G T A C G T
Reverse Opposite:
C G T A C G T A C T G A A G T C C G A T G T A C A C T G C G T A A C T G A G C T A C G T A C G T A G T C
p-value:1e-8
log p-value:-1.925e+01
Information Content per bp:1.912
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.7 +/- 8.7bp
Average Position of motif in Background74.5 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAARCTMGAGTTT
AGAAACGAAAGT--
 A C G T T C A G C G T A C G T A C T G A A G T C A C G T G T A C A C T G C G T A A C T G A G C T A C G T A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAARCTMGAGTTT
GWAAYHTGAKMC-
 T C A G C G T A C G T A C T G A A G T C A C G T G T A C A C T G C G T A A C T G A G C T A C G T A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GAARCTMGAGTTT
CGTATCGAAACCAAA----
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A C G T A C T G A A G T C A C G T G T A C A C T G C G T A A C T G A G C T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GAARCTMGAGTTT
GRTGMTRGAGCC-
 T C A G C G T A C G T A C T G A A G T C A C G T G T A C A C T G C G T A A C T G A G C T A C G T A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GAARCTMGAGTTT
-AAGCTTG-----
 T C A G C G T A C G T A C T G A A G T C A C G T G T A C A C T G C G T A A C T G A G C T A C G T A C G T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:6
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------GAARCTMGAGTTT
CTGATCGAAACCAAAGT--
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A C G T A C T G A A G T C A C G T G T A C A C T G C G T A A C T G A G C T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GAARCTMGAGTTT---
--NNGTANTGTTTTNC
 T C A G C G T A C G T A C T G A A G T C A C G T G T A C A C T G C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GAARCTMGAGTTT----
-NNATTGGACTTTNGNN
 T C A G C G T A C G T A C T G A A G T C A C G T G T A C A C T G C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GAARCTMGAGTTT
GWAAYHTGABMC-
 T C A G C G T A C G T A C T G A A G T C A C G T G T A C A C T G C G T A A C T G A G C T A C G T A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GAARCTMGAGTTT
ACTGAAACCA------
 A C G T A C G T A C G T T C A G C G T A C G T A C T G A A G T C A C G T G T A C A C T G C G T A A C T G A G C T A C G T A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T