Information for 7-CCTAGCGCCR (Motif 15)

A T G C G T A C A C G T C T G A A T C G G T A C A C T G T G A C A G T C T C G A
Reverse Opposite:
A G C T A C T G A C T G G T A C A C T G A T G C A G C T T G C A A C T G A T C G
p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.720
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif109.4
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets54.6 +/- 25.7bp
Average Position of motif in Background50.9 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCTAGCGCCR----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A T G C G T A C A C G T C T G A A T C G G T A C A C T G T G A C A G T C T C G A A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCTAGCGCCR----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A T G C G T A C A C G T C T G A A T C G G T A C A C T G T G A C A G T C T C G A A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCTAGCGCCR-
SCCTAGCAACAG
 A C G T A T G C G T A C A C G T C T G A A T C G G T A C A C T G T G A C A G T C T C G A A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCTAGCGCCR--
CCGCATAGCAACGGA
 A C G T A C G T A C G T A T G C G T A C A C G T C T G A A T C G G T A C A C T G T G A C A G T C T C G A A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCTAGCGCCR--
TACCATAGCAACGGT
 A C G T A C G T A C G T A T G C G T A C A C G T C T G A A T C G G T A C A C T G T G A C A G T C T C G A A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------CCTAGCGCCR------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C A C G T C T G A A T C G G T A C A C T G T G A C A G T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCTAGCGCCR
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C A C G T C T G A A T C G G T A C A C T G T G A C A G T C T C G A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCTAGCGCCR--
TTTGGCGCCAAA
 A T G C G T A C A C G T C T G A A T C G G T A C A C T G T G A C A G T C T C G A A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCTAGCGCCR
--CAGCC---
 A T G C G T A C A C G T C T G A A T C G G T A C A C T G T G A C A G T C T C G A
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCTAGCGCCR
----GCTCCG
 A T G C G T A C A C G T C T G A A T C G G T A C A C T G T G A C A G T C T C G A
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G