Information for 5-CGAGGACCTCACAGCC (Motif 12)

A G T C C T A G G T C A A T C G A T C G C G T A G T A C A G T C A C G T A G T C G T C A T A G C C T G A A T C G A G T C A T G C
Reverse Opposite:
A T C G A C T G A T G C A G C T A T C G C A G T A C T G G T C A A C T G A C T G A C G T A T G C A T G C A C G T A G T C A C T G
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.821
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 29.0bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGAGGACCTCACAGCC
---GGACCACCCACG-
 A G T C C T A G G T C A A T C G A T C G C G T A G T A C A G T C A C G T A G T C G T C A T A G C C T G A A T C G A G T C A T G C
A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGAGGACCTCACAGCC--
---TGACCTCTGACCCCN
 A G T C C T A G G T C A A T C G A T C G C G T A G T A C A G T C A C G T A G T C G T C A T A G C C T G A A T C G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.48
Offset:11
Orientation:forward strand
Alignment:CGAGGACCTCACAGCC
-----------CAGCC
 A G T C C T A G G T C A A T C G A T C G C G T A G T A C A G T C A C G T A G T C G T C A T A G C C T G A A T C G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:CGAGGACCTCACAGCC
--------TCACACCT
 A G T C C T A G G T C A A T C G A T C G C G T A G T A C A G T C A C G T A G T C G T C A T A G C C T G A A T C G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.47
Offset:5
Orientation:forward strand
Alignment:CGAGGACCTCACAGCC
-----AAATCACAGCA
 A G T C C T A G G T C A A T C G A T C G C G T A G T A C A G T C A C G T A G T C G T C A T A G C C T G A A T C G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--CGAGGACCTCACAGCC
GCCGCGCAGTGCGT----
 A C G T A C G T A G T C C T A G G T C A A T C G A T C G C G T A G T A C A G T C A C G T A G T C G T C A T A G C C T G A A T C G A G T C A T G C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:CGAGGACCTCACAGCC
--------TCACACCT
 A G T C C T A G G T C A A T C G A T C G C G T A G T A C A G T C A C G T A G T C G T C A T A G C C T G A A T C G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:CGAGGACCTCACAGCC-
-----YCCGCCCACGCN
 A G T C C T A G G T C A A T C G A T C G C G T A G T A C A G T C A C G T A G T C G T C A T A G C C T G A A T C G A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.47
Offset:9
Orientation:reverse strand
Alignment:CGAGGACCTCACAGCC
---------CACAGN-
 A G T C C T A G G T C A A T C G A T C G C G T A G T A C A G T C A C G T A G T C G T C A T A G C C T G A A T C G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--CGAGGACCTCACAGCC
NNNNGGTACCCCCCANN-
 A C G T A C G T A G T C C T A G G T C A A T C G A T C G C G T A G T A C A G T C A C G T A G T C G T C A T A G C C T G A A T C G A G T C A T G C
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C A C G T