Information for 2-TCTGAATGAT (Motif 4)

A C G T A T G C C G A T A C T G C G T A C T G A A C G T C T A G G C T A G A C T
Reverse Opposite:
C T G A C G A T A G T C C G T A A G C T A C G T A G T C C G T A A T C G C G T A
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.856
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif42.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets53.8 +/- 27.5bp
Average Position of motif in Background53.9 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCTGAATGAT----
ACTATGAATGAATGAT
 A C G T A C G T A C G T A T G C C G A T A C T G C G T A C T G A A C G T C T A G G C T A G A C T A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCTGAATGAT--
TTTGATTGATGN
 A C G T A T G C C G A T A C T G C G T A C T G A A C G T C T A G G C T A G A C T A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TCTGAATGAT---
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T A T G C C G A T A C T G C G T A C T G A A C G T C T A G G C T A G A C T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGAATGAT
NNTNTCATGAATGT-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G A T A C T G C G T A C T G A A C G T C T A G G C T A G A C T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCTGAATGAT--
--TGATTGATGA
 A C G T A T G C C G A T A C T G C G T A C T G A A C G T C T A G G C T A G A C T A C G T A C G T
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

FOS/MA0476.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCTGAATGAT-
TGTGACTCATT
 A C G T A T G C C G A T A C T G C G T A C T G A A C G T C T A G G C T A G A C T A C G T
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

PB0176.1_Sox5_2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCTGAATGAT----
NNCTNAATTATGANN
 A C G T A C G T A T G C C G A T A C T G C G T A C T G A A C G T C T A G G C T A G A C T A C G T A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCTGAATGAT----
NNANTGATTGATNNNN
 A C G T A C G T A C G T A T G C C G A T A C T G C G T A C T G A A C G T C T A G G C T A G A C T A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCTGAATGAT----
NNANTGATTGATNTTN
 A C G T A C G T A C G T A T G C C G A T A C T G C G T A C T G A A C G T C T A G G C T A G A C T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCTGAATGAT
ATTTGAATT--
 A C G T A C G T A T G C C G A T A C T G C G T A C T G A A C G T C T A G G C T A G A C T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T