Information for 8-GAGGGCCAGCTNCKTC (Motif 35)

A T C G C G T A C T A G A C T G A T C G A T G C A G T C G C T A A T C G A T G C A G C T C G T A A G T C A C T G A G C T A G T C
Reverse Opposite:
A C T G T C G A G T A C T C A G A C G T T C G A A T C G A T G C C G A T A C T G A T C G A T G C A G T C A G T C A C G T A T G C
p-value:1e-5
log p-value:-1.289e+01
Information Content per bp:1.735
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.6 +/- 26.0bp
Average Position of motif in Background42.8 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGGGCCAGCTNCKTC
CAAGGHCANV------
 A T C G C G T A C T A G A C T G A T C G A T G C A G T C G C T A A T C G A T G C A G C T C G T A A G T C A C T G A G C T A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GAGGGCCAGCTNCKTC
AAGTTCAAGGTCAGC------
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A C T A G A C T G A T C G A T G C A G T C G C T A A T C G A T G C A G C T C G T A A G T C A C T G A G C T A G T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAGGGCCAGCTNCKTC--
---TGCCTGCGYCMCCTT
 A T C G C G T A C T A G A C T G A T C G A T G C A G T C G C T A A T C G A T G C A G C T C G T A A G T C A C T G A G C T A G T C A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCCAGCTNCKTC
NTCAAGGTCA--------
 A C G T A C G T A T C G C G T A C T A G A C T G A T C G A T G C A G T C G C T A A T C G A T G C A G C T C G T A A G T C A C T G A G C T A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCCAGCTNCKTC
BTCAAGGTCA--------
 A C G T A C G T A T C G C G T A C T A G A C T G A T C G A T G C A G T C G C T A A T C G A T G C A G C T C G T A A G T C A C T G A G C T A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCCAGCTNCKTC
CAAAGGTCAG-------
 A C G T A T C G C G T A C T A G A C T G A T C G A T G C A G T C G C T A A T C G A T G C A G C T C G T A A G T C A C T G A G C T A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGGGCCAGCTNCKTC
-AAGGTCAC-------
 A T C G C G T A C T A G A C T G A T C G A T G C A G T C G C T A A T C G A T G C A G C T C G T A A G T C A C T G A G C T A G T C
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAGGGCCAGCTNCKTC
--AGGCCTAG------
 A T C G C G T A C T A G A C T G A T C G A T G C A G T C G C T A A T C G A T G C A G C T C G T A A G T C A C T G A G C T A G T C
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGCCAGCTNCKTC
TCAAGGTCAN-------
 A C G T A T C G C G T A C T A G A C T G A T C G A T G C A G T C G C T A A T C G A T G C A G C T C G T A A G T C A C T G A G C T A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCCAGCTNCKTC
NTGATTGACAGN------
 A C G T A C G T A T C G C G T A C T A G A C T G A T C G A T G C A G T C G C T A A T C G A T G C A G C T C G T A A G T C A C T G A G C T A G T C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T