Information for 20-CCACAYASATCCT (Motif 30)

A G T C A G T C C G T A A T G C C T G A A G T C C G T A A T C G G T C A A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G G T C A A C G T A T G C A C G T C T A G A G C T A T C G A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.426e+01
Information Content per bp:1.910
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.4 +/- 23.2bp
Average Position of motif in Background66.7 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCACAYASATCCT
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T G C C T G A A G T C C G T A A T C G G T C A A C G T A G T C A G T C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCACAYASATCCT-----
--GATAACATCCTAGTAG
 A G T C A G T C C G T A A T G C C T G A A G T C C G T A A T C G G T C A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCACAYASATCCT
AAACCACAGAN-----
 A C G T A C G T A C G T A G T C A G T C C G T A A T G C C T G A A G T C C G T A A T C G G T C A A C G T A G T C A G T C A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCACAYASATCCT---
------ACATCCTGNT
 A G T C A G T C C G T A A T G C C T G A A G T C C G T A A T C G G T C A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCACAYASATCCT
GCCACACCCA----
 A C G T A G T C A G T C C G T A A T G C C T G A A G T C C G T A A T C G G T C A A C G T A G T C A G T C A C G T
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCACAYASATCCT-
---AAGATATCCTT
 A G T C A G T C C G T A A T G C C T G A A G T C C G T A A T C G G T C A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCACAYASATCCT--
---ACCACATCCTGT
 A G T C A G T C C G T A A T G C C T G A A G T C C G T A A T C G G T C A A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCACAYASATCCT
ATCCAC---------
 A C G T A C G T A G T C A G T C C G T A A T G C C T G A A G T C C G T A A T C G G T C A A C G T A G T C A G T C A C G T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCACAYASATCCT
AAACCACANN------
 A C G T A C G T A C G T A G T C A G T C C G T A A T G C C T G A A G T C C G T A A T C G G T C A A C G T A G T C A G T C A C G T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCACAYASATCCT
GGCCACACCCAN---
 A C G T A C G T A G T C A G T C C G T A A T G C C T G A A G T C C G T A A T C G G T C A A C G T A G T C A G T C A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T