Information for 17-TGGARWSACMCAG (Motif 27)

A G C T A C T G A C T G C G T A C T G A C G A T A T C G G T C A A G T C G T C A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T C T A G A C G T A C T G A C G T A T G C C G T A A G C T A C G T A G T C A G T C C T G A
p-value:1e-7
log p-value:-1.667e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.6 +/- 26.0bp
Average Position of motif in Background41.5 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGGARWSACMCAG
-GGAAATCCCC--
 A G C T A C T G A C T G C G T A C T G A C G A T A T C G G T C A A G T C G T C A A G T C C G T A A C T G
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGARWSACMCAG
-GGAAANCCCC--
 A G C T A C T G A C T G C G T A C T G A C G A T A T C G G T C A A G T C G T C A A G T C C G T A A C T G
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TGGARWSACMCAG-
--------CACAGN
 A G C T A C T G A C T G C G T A C T G A C G A T A T C G G T C A A G T C G T C A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGGARWSACMCAG
NNTGGAAANN-----
 A C G T A C G T A G C T A C T G A C T G C G T A C T G A C G A T A T C G G T C A A G T C G T C A A G T C C G T A A C T G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGGARWSACMCAG
-GGAAATTCCC--
 A G C T A C T G A C T G C G T A C T G A C G A T A T C G G T C A A G T C G T C A A G T C C G T A A C T G
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGARWSACMCAG
GGGAAATCCCCN-
 A G C T A C T G A C T G C G T A C T G A C G A T A T C G G T C A A G T C G T C A A G T C C G T A A C T G
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGARWSACMCAG
AATGGAAAAT-----
 A C G T A C G T A G C T A C T G A C T G C G T A C T G A C G A T A T C G G T C A A G T C G T C A A G T C C G T A A C T G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGARWSACMCAG
AATGGAAAAT-----
 A C G T A C G T A G C T A C T G A C T G C G T A C T G A C G A T A T C G G T C A A G T C G T C A A G T C C G T A A C T G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGGARWSACMCAG---
----ATGACTCAGCAD
 A G C T A C T G A C T G C G T A C T G A C G A T A T C G G T C A A G T C G T C A A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGGARWSACMCAG
ATGGGGTGAT----
 A C G T A G C T A C T G A C T G C G T A C T G A C G A T A T C G G T C A A G T C G T C A A G T C C G T A A C T G
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T