Information for 10-AAGGARMRTGTGC (Motif 15)

C G T A C G T A C T A G A C T G C G T A C T A G G T C A C T A G A C G T A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C C G T A G A C T C A G T A G T C A C G T A G T C A G T C A C G T A C G T
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.889
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.4 +/- 25.7bp
Average Position of motif in Background58.9 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAGGARMRTGTGC----
-NNGCGTGTGTGCNGCN
 C G T A C G T A C T A G A C T G C G T A C T A G G T C A C T A G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAGGARMRTGTGC-----
--GGGCCGTGTGCAAAAA
 C G T A C G T A C T A G A C T G C G T A C T A G G T C A C T A G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAGGARMRTGTGC-----
NANTGGAAAAANTGAGTCAN
 A C G T A C G T C G T A C G T A C T A G A C T G C G T A C T A G G T C A C T A G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:AAGGARMRTGTGC----
-------CTGTTCCTGG
 C G T A C G T A C T A G A C T G C G T A C T A G G T C A C T A G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AAGGARMRTGTGC-------
---NNGTATGTGCACATNNN
 C G T A C G T A C T A G A C T G C G T A C T A G G T C A C T A G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AAGGARMRTGTGC----
-NNNNTTGTGTGCTTNN
 C G T A C G T A C T A G A C T G C G T A C T A G G T C A C T A G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AAGGARMRTGTGC---
--GTGCCGTGTGCAAA
 C G T A C G T A C T A G A C T G C G T A C T A G G T C A C T A G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

PB0104.1_Zscan4_1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AAGGARMRTGTGC-------
---NTNTATGTGCACATNNN
 C G T A C G T A C T A G A C T G C G T A C T A G G T C A C T A G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AAGGARMRTGTGC
AAGGCAAGTGT--
 C G T A C G T A C T A G A C T G C G T A C T A G G T C A C T A G A C G T A C T G A C G T A C T G A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AAGGARMRTGTGC-
---GCGCCTGCGCA
 C G T A C G T A C T A G A C T G C G T A C T A G G T C A C T A G A C G T A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A