Information for 5-GAGGCCTTAG (Motif 11)

A T C G G T C A A T C G T C A G T A G C G T A C A G C T C A G T C G T A A C T G
Reverse Opposite:
A G T C G C A T G T C A T C G A C A T G A T C G A G T C T A G C A C G T A T G C
p-value:1e-9
log p-value:-2.278e+01
Information Content per bp:1.684
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif8.40%
Number of Background Sequences with motif1663.3
Percentage of Background Sequences with motif3.44%
Average Position of motif in Targets52.5 +/- 27.9bp
Average Position of motif in Background51.2 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAGGCCTTAG
-AGGCCTNG-
 A T C G G T C A A T C G T C A G T A G C G T A C A G C T C A G T C G T A A C T G
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAGGCCTTAG----
CAGGCCNNGGCCNN
 A T C G G T C A A T C G T C A G T A G C G T A C A G C T C A G T C G T A A C T G A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCCTTAG
CTAGGCCT---
 A C G T A T C G G T C A A T C G T C A G T A G C G T A C A G C T C A G T C G T A A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGGCCTTAG
CAAGACGCCTTA-
 A C G T A C G T A C G T A T C G G T C A A T C G T C A G T A G C G T A C A G C T C A G T C G T A A C T G
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGGCCTTAG----
GGGGCCCAAGGGGG
 A T C G G T C A A T C G T C A G T A G C G T A C A G C T C A G T C G T A A C T G A C G T A C G T A C G T A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAGGCCTTAG---
--NGCCTGAGGCN
 A T C G G T C A A T C G T C A G T A G C G T A C A G C T C A G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAGGCCTTAG---
--TGCCTGAGGCN
 A T C G G T C A A T C G T C A G T A G C G T A C A G C T C A G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAGGCCTTAG---
--NGCCTNAGGCN
 A T C G G T C A A T C G T C A G T A G C G T A C A G C T C A G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GAGGCCTTAG-----
---GCCTCAGGGCAT
 A T C G G T C A A T C G T C A G T A G C G T A C A G C T C A G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAGGCCTTAG-----
---SCCTSAGGSCAW
 A T C G G T C A A T C G T C A G T A G C G T A C A G C T C A G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T