Information for 1-AGAAACACAGCCG (Motif 1)

C G T A A C T G G T C A C T G A C T G A A G T C C T G A G T A C C G T A A C T G A T G C A G T C A C T G
Reverse Opposite:
G T A C C T A G A T C G A G T C A C G T A C T G A G C T A C T G A G C T A G C T A C G T G T A C A C G T
p-value:1e-16
log p-value:-3.761e+01
Information Content per bp:1.823
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.9 +/- 25.7bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AGAAACACAGCCG
-----CACAGN--
 C G T A A C T G G T C A C T G A C T G A A G T C C T G A G T A C C G T A A C T G A T G C A G T C A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGAAACACAGCCG
-AAACCACAGC--
 C G T A A C T G G T C A C T G A C T G A A G T C C T G A G T A C C G T A A C T G A T G C A G T C A C T G
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGAAACACAGCCG
-AAATCACAGCA-
 C G T A A C T G G T C A C T G A C T G A A G T C C T G A G T A C C G T A A C T G A T G C A G T C A C T G
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAAACACAGCCG----
--GAGCACAGCAGGACA
 C G T A A C T G G T C A C T G A C T G A A G T C C T G A G T A C C G T A A C T G A T G C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGAAACACAGCCG
-AAATCACTGC--
 C G T A A C T G G T C A C T G A C T G A A G T C C T G A G T A C C G T A A C T G A T G C A G T C A C T G
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGAAACACAGCCG
-AAACCACAGAN-
 C G T A A C T G G T C A C T G A C T G A A G T C C T G A G T A C C G T A A C T G A T G C A G T C A C T G
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAAACACAGCCG--
AGAGRRACAGCWGAC
 C G T A A C T G G T C A C T G A C T G A A G T C C T G A G T A C C G T A A C T G A T G C A G T C A C T G A C G T A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:forward strand
Alignment:AGAAACACAGCCG
-------CAGCC-
 C G T A A C T G G T C A C T G A C T G A A G T C C T G A G T A C C G T A A C T G A T G C A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGAAACACAGCCG----
--CCACACAGCAGGAGA
 C G T A A C T G G T C A C T G A C T G A A G T C C T G A G T A C C G T A A C T G A T G C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAAACACAGCCG---
AGCGGCACACACGCAA
 C G T A A C T G G T C A C T G A C T G A A G T C C T G A G T A C C G T A A C T G A T G C A G T C A C T G A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A