Information for 6-GCAGCTGTTCCAA (Motif 23)

A T C G G A T C C G T A A C T G A G T C A C G T A T C G A C G T C G A T A G T C A G T C G T C A G T C A
Reverse Opposite:
A C G T A C G T A C T G A C T G C G T A T C G A A T G C C G T A C T A G A G T C A C G T C T A G A T G C
p-value:1e-7
log p-value:-1.770e+01
Information Content per bp:1.820
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif29.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets62.2 +/- 22.1bp
Average Position of motif in Background49.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGTTCCAA
TGCAGCTGTCCCT-
 A C G T A T C G G A T C C G T A A C T G A G T C A C G T A T C G A C G T C G A T A G T C A G T C G T C A G T C A
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCTGTTCCAA
AGCAGCTGCT----
 A C G T A T C G G A T C C G T A A C T G A G T C A C G T A T C G A C G T C G A T A G T C A G T C G T C A G T C A
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGTTCCAA
AGCAGCTGCTNN--
 A C G T A T C G G A T C C G T A A C T G A G T C A C G T A T C G A C G T C G A T A G T C A G T C G T C A G T C A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTGTTCCAA
NNGCAGCTGTT----
 A C G T A C G T A T C G G A T C C G T A A C T G A G T C A C G T A T C G A C G T C G A T A G T C A G T C G T C A G T C A
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GCAGCTGTTCCAA
-CAGCTGTT----
 A T C G G A T C C G T A A C T G A G T C A C G T A T C G A C G T C G A T A G T C A G T C G T C A G T C A
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCAGCTGTTCCAA
CCAGCTGTTN---
 A T C G G A T C C G T A A C T G A G T C A C G T A T C G A C G T C G A T A G T C A G T C G T C A G T C A
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTGTTCCAA
NNGCAGCTGTC----
 A C G T A C G T A T C G G A T C C G T A A C T G A G T C A C G T A T C G A C G T C G A T A G T C A G T C G T C A G T C A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCAGCTGTTCCAA
NCAGCTGCTG---
 A T C G G A T C C G T A A C T G A G T C A C G T A T C G A C G T C G A T A G T C A G T C G T C A G T C A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCAGCTGTTCCAA
GCAGCTGTNN---
 A T C G G A T C C G T A A C T G A G T C A C G T A T C G A C G T C G A T A G T C A G T C G T C A G T C A
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCAGCTGTTCCAA
ACAGCTGTTV---
 A T C G G A T C C G T A A C T G A G T C A C G T A T C G A C G T C G A T A G T C A G T C G T C A G T C A
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T A C G T