Information for 2-CCTTAGGAGSGAGRGA (Motif 2)

A G T C G T A C A G C T A G C T G T C A C T A G A C T G G T C A C T A G A T C G T A C G C T G A T A C G T C A G A C T G C G T A
Reverse Opposite:
C G A T A G T C A G T C A G T C A G C T A G T C T A G C A G T C A C G T A G T C A G T C A C G T C T G A C T G A A C T G A C T G
p-value:1e-13
log p-value:-3.001e+01
Information Content per bp:1.725
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 25.1bp
Average Position of motif in Background57.1 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:1
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAGGAGSGAGRGA
NGCCTNAGGCN-------
 A C G T A C G T A G T C G T A C A G C T A G C T G T C A C T A G A C T G G T C A C T A G A T C G T A C G C T G A T A C G T C A G A C T G C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGAGSGAGRGA
WTGSCCTSAGGS--------
 A C G T A C G T A C G T A C G T A G T C G T A C A G C T A G C T G T C A C T A G A C T G G T C A C T A G A T C G T A C G C T G A T A C G T C A G A C T G C G T A
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCTTAGGAGSGAGRGA
AGCCTCAGGCA-------
 A C G T A C G T A G T C G T A C A G C T A G C T G T C A C T A G A C T G G T C A C T A G A T C G T A C G C T G A T A C G T C A G A C T G C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCTTAGGAGSGAGRGA
CGCCTCAGGCA-------
 A C G T A C G T A G T C G T A C A G C T A G C T G T C A C T A G A C T G G T C A C T A G A T C G T A C G C T G A T A C G T C A G A C T G C G T A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCTTAGGAGSGAGRGA
ATGCCCTGAGGC--------
 A C G T A C G T A C G T A C G T A G T C G T A C A G C T A G C T G T C A C T A G A C T G G T C A C T A G A T C G T A C G C T G A T A C G T C A G A C T G C G T A
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCTTAGGAGSGAGRGA
ATTGCCTGAGGCGAA-----
 A C G T A C G T A C G T A C G T A G T C G T A C A G C T A G C T G T C A C T A G A C T G G T C A C T A G A T C G T A C G C T G A T A C G T C A G A C T G C G T A
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCTTAGGAGSGAGRGA
ATTGCCTGAGGCAAT-----
 A C G T A C G T A C G T A C G T A G T C G T A C A G C T A G C T G T C A C T A G A C T G G T C A C T A G A T C G T A C G C T G A T A C G T C A G A C T G C G T A
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CCTTAGGAGSGAGRGA
ATTCCCTGAGGGGAA-----
 A C G T A C G T A C G T A C G T A G T C G T A C A G C T A G C T G T C A C T A G A C T G G T C A C T A G A T C G T A C G C T G A T A C G T C A G A C T G C G T A
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGAGSGAGRGA
GCACCCCTGGGTGCC-----
 A C G T A C G T A C G T A C G T A G T C G T A C A G C T A G C T G T C A C T A G A C T G G T C A C T A G A T C G T A C G C T G A T A C G T C A G A C T G C G T A
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CCTTAGGAGSGAGRGA
----GGGCGGGAAGG-
 A G T C G T A C A G C T A G C T G T C A C T A G A C T G G T C A C T A G A T C G T A C G C T G A T A C G T C A G A C T G C G T A
A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T