Information for 3-CCWGGWAARGTCW (Motif 7)

A G T C A G T C C G T A A C T G A C T G C G T A T C G A G T C A C T G A A C T G A C G T G T A C C G T A
Reverse Opposite:
C G A T A C T G C G T A A G T C A G C T A C G T A C G T C G A T A G T C A G T C C G A T A C T G A C T G
p-value:1e-11
log p-value:-2.645e+01
Information Content per bp:1.869
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 32.5bp
Average Position of motif in Background55.5 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCWGGWAARGTCW
-ANGNAAAGGTCA
 A G T C A G T C C G T A A C T G A C T G C G T A T C G A G T C A C T G A A C T G A C G T G T A C C G T A
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CCWGGWAARGTCW-
-----AAAAGTCAA
 A G T C A G T C C G T A A C T G A C T G C G T A T C G A G T C A C T G A A C T G A C G T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCWGGWAARGTCW
TTTCCTGGAAAGNNN-
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G C G T A T C G A G T C A C T G A A C T G A C G T G T A C C G T A
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCWGGWAARGTCW----
-TCTCAAAGGTCACGAG
 A G T C A G T C C G T A A C T G A C T G C G T A T C G A G T C A C T G A A C T G A C G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCWGGWAARGTCW
--TGGAAAA----
 A G T C A G T C C G T A A C T G A C T G C G T A T C G A G T C A C T G A A C T G A C G T G T A C C G T A
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCWGGWAARGTCW----
-TCTCAAAGGTCACCTG
 A G T C A G T C C G T A A C T G A C T G C G T A T C G A G T C A C T G A A C T G A C G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCWGGWAARGTCW
NTTTCCNGGAAA-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G C G T A T C G A G T C A C T G A A C T G A C G T G T A C C G T A
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CCWGGWAARGTCW-
------AAGGTCAC
 A G T C A G T C C G T A A C T G A C T G C G T A T C G A G T C A C T G A A C T G A C G T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCWGGWAARGTCW-
----TCAAGGTCAN
 A G T C A G T C C G T A A C T G A C T G C G T A T C G A G T C A C T G A A C T G A C G T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCWGGWAARGTCW
NCTTCCNGGAAGNN---
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G C G T A T C G A G T C A C T G A A C T G A C G T G T A C C G T A
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G A C G T A C G T A C G T