Information for 4-GCGCCCACTGTTCCGG (Motif 6)

A T C G T G A C A C T G A G T C G T A C A T G C C G T A A T G C C G A T A T C G A C G T A C G T A G T C G T A C A T C G A C T G
Reverse Opposite:
G T A C A T G C A C T G A C T G C G T A C G T A A T G C C G T A A T C G A C G T A T C G A C T G A C T G G T A C A C T G A T G C
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.808
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 25.4bp
Average Position of motif in Background58.9 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCGCCCACTGTTCCGG
---NCCATTGTTC---
 A T C G T G A C A C T G A G T C G T A C A T G C C G T A A T G C C G A T A T C G A C G T A C G T A G T C G T A C A T C G A C T G
A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCCACTGTTCCGG
YCCGCCCACGCN-----
 A C G T A T C G T G A C A C T G A G T C G T A C A T G C C G T A A T G C C G A T A T C G A C G T A C G T A G T C G T A C A T C G A C T G
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GCGCCCACTGTTCCGG-
-------HACTTCCGGY
 A T C G T G A C A C T G A G T C G T A C A T G C C G T A A T G C C G A T A T C G A C G T A C G T A G T C G T A C A T C G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCGCCCACTGTTCCGG
----CCATTGTTC---
 A T C G T G A C A C T G A G T C G T A C A T G C C G T A A T G C C G A T A T C G A C G T A C G T A G T C G T A C A T C G A C T G
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GCGCCCACTGTTCCGG-
-------NRYTTCCGGY
 A T C G T G A C A C T G A G T C G T A C A T G C C G T A A T G C C G A T A T C G A C G T A C G T A G T C G T A C A T C G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T

MF0001.1_ETS_class/Jaspar

Match Rank:6
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:GCGCCCACTGTTCCGG-
---------CTTCCGGT
 A T C G T G A C A C T G A G T C G T A C A T G C C G T A A T G C C G A T A T C G A C G T A C G T A G T C G T A C A T C G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GCGCCCACTGTTCCGG-
-------CTGTTCCTGG
 A T C G T G A C A C T G A G T C G T A C A T G C C G T A A T G C C G A T A T C G A C G T A C G T A G T C G T A C A T C G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCGCCCACTGTTCCGG
----CCATTGTTYB--
 A T C G T G A C A C T G A G T C G T A C A T G C C G T A A T G C C G A T A T C G A C G T A C G T A G T C G T A C A T C G A C T G
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:GCGCCCACTGTTCCGG--
--------ACTTCCGGNT
 A T C G T G A C A C T G A G T C G T A C A T G C C G T A A T G C C G A T A T C G A C G T A C G T A G T C G T A C A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T

ELK3/MA0759.1/Jaspar

Match Rank:10
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GCGCCCACTGTTCCGG-
-------NACTTCCGGT
 A T C G T G A C A C T G A G T C G T A C A T G C C G T A A T G C C G A T A T C G A C G T A C G T A G T C G T A C A T C G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C G A A G T C C G A T A C G T T G A C A G T C A C T G A C T G G A C T