Information for 3-AAGGGCTGAA (Motif 18)

C T G A G C T A C A T G T A C G T A C G A T G C G C A T A T C G T C G A C T G A
Reverse Opposite:
G A C T A G C T T A G C C G T A T A C G A T G C A T G C G T A C C G A T G A C T
p-value:1e-9
log p-value:-2.274e+01
Information Content per bp:1.557
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif199.2
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets46.1 +/- 23.5bp
Average Position of motif in Background50.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AAGGGCTGAA
-AGGCCTNG-
 C T G A G C T A C A T G T A C G T A C G A T G C G C A T A T C G T C G A C T G A
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AAGGGCTGAA
---NGCTN--
 C T G A G C T A C A T G T A C G T A C G A T G C G C A T A T C G T C G A C T G A
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAGGGCTGAA
TNNGGGCAG--
 A C G T C T G A G C T A C A T G T A C G T A C G A T G C G C A T A T C G T C G A C T G A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGGGCTGAA
-AGGCCTAG-
 C T G A G C T A C A T G T A C G T A C G A T G C G C A T A T C G T C G A C T G A
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGGGCTGAA
TAATGGCGGNC
 A C G T C T G A G C T A C A T G T A C G T A C G A T G C G C A T A T C G T C G A C T G A
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGGGCTGAA
CAAAGGTCAG--
 A C G T A C G T C T G A G C T A C A T G T A C G T A C G A T G C G C A T A T C G T C G A C T G A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGGGCTGAA-
AAAATGCTGACT
 A C G T C T G A G C T A C A T G T A C G T A C G A T G C G C A T A T C G T C G A C T G A A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAGGGCTGAA
NTCAAGGTCA---
 A C G T A C G T A C G T C T G A G C T A C A T G T A C G T A C G A T G C G C A T A T C G T C G A C T G A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGGGCTGAA
CAAGGHCANV-
 A C G T C T G A G C T A C A T G T A C G T A C G A T G C G C A T A T C G T C G A C T G A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGCTGAA---
AAAWWTGCTGACWWD
 A C G T A C G T C T G A G C T A C A T G T A C G T A C G A T G C G C A T A T C G T C G A C T G A A C G T A C G T A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G