Information for 1-AGGGTATATA (Motif 12)

C T G A C T A G A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T G T C A C G A T G T C A A C G T C G T A A G T C G T A C A G T C A G C T
p-value:1e-10
log p-value:-2.519e+01
Information Content per bp:1.868
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.1 +/- 33.2bp
Average Position of motif in Background38.6 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTATATA------
ANNNGGATATATCCNNN
 A C G T C T G A C T A G A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AGGGTATATA--------
---GTATAAAAGGCGGGG
 C T G A C T A G A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AGGGTATATA--------
---GTATAAAAGGCGGGG
 C T G A C T A G A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTATATA
AAGGATATNTN
 A C G T C T G A C T A G A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGGTATATA----
AATAGGGTATCAATATT
 A C G T A C G T A C G T C T G A C T A G A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGGTATATA---
NCWRWGTAAACANSV
 A C G T A C G T C T G A C T A G A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGGTATATA
WAAGTAAAYA
 C T G A C T A G A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTATATA----
CAAAGTAAACANNNN
 A C G T C T G A C T A G A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

PH0165.1_Six6_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGGGTATATA----
AATAGGGTATCAATTAT
 A C G T A C G T A C G T C T G A C T A G A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGGTATATA-
TATGTAAATAT
 C T G A C T A G A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T