Information for 1-CTMAGTGTCCKGGACC (Motif 1)

A T G C A G C T T G A C C G T A A C T G C A G T A C T G C G A T A G T C G A T C A C G T A T C G A T C G T C G A A G T C T A G C
Reverse Opposite:
A C T G A C T G A G C T A T G C A T G C G T C A C T A G A C T G C G T A T A G C G T C A G T A C C G A T A C T G T C G A A T C G
p-value:1e-15
log p-value:-3.515e+01
Information Content per bp:1.721
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.1 +/- 15.0bp
Average Position of motif in Background60.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTMAGTGTCCKGGACC
-TCAGNGAGCGTGAC-
 A T G C A G C T T G A C C G T A A C T G C A G T A C T G C G A T A G T C G A T C A C G T A T C G A T C G T C G A A G T C T A G C
A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTMAGTGTCCKGGACC-
-----TGACCTTGACCT
 A T G C A G C T T G A C C G T A A C T G C A G T A C T G C G A T A G T C G A T C A C G T A T C G A T C G T C G A A G T C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTMAGTGTCCKGGACC-
-----TGACCTTGACCT
 A T G C A G C T T G A C C G T A A C T G C A G T A C T G C G A T A G T C G A T C A C G T A T C G A T C G T C G A A G T C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTMAGTGTCCKGGACC-
-----TGTCTGDCACCT
 A T G C A G C T T G A C C G T A A C T G C A G T A C T G C G A T A G T C G A T C A C G T A T C G A T C G T C G A A G T C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CTMAGTGTCCKGGACC-
----CTGTCTGTCACCT
 A T G C A G C T T G A C C G T A A C T G C A G T A C T G C G A T A G T C G A T C A C G T A T C G A T C G T C G A A G T C T A G C A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CTMAGTGTCCKGGACC
TGACCCAGTGACCTAC---
 A C G T A C G T A C G T A T G C A G C T T G A C C G T A A C T G C A G T A C T G C G A T A G T C G A T C A C G T A T C G A T C G T C G A A G T C T A G C
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTMAGTGTCCKGGACC
-NRRGGGTCTT-----
 A T G C A G C T T G A C C G T A A C T G C A G T A C T G C G A T A G T C G A T C A C G T A T C G A T C G T C G A A G T C T A G C
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CTMAGTGTCCKGGACC
------GGGCGGGACC
 A T G C A G C T T G A C C G T A A C T G C A G T A C T G C G A T A G T C G A T C A C G T A T C G A T C G T C G A A G T C T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.47
Offset:4
Orientation:forward strand
Alignment:CTMAGTGTCCKGGACC----
----GAGCCCTTGTCCCTAA
 A T G C A G C T T G A C C G T A A C T G C A G T A C T G C G A T A G T C G A T C A C G T A T C G A T C G T C G A A G T C T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CTMAGTGTCCKGGACC
--CAACGTCCGCGG--
 A T G C A G C T T G A C C G T A A C T G C A G T A C T G C G A T A G T C G A T C A C G T A T C G A T C G T C G A A G T C T A G C
A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T