Information for 4-CCGAGYTCCC (Motif 9)

A T G C A T G C T C A G G T C A A T C G A G C T A C G T A G T C A T G C A G T C
Reverse Opposite:
T C A G T A C G T C A G G T C A T C G A A T G C A C G T A G T C A T C G T A C G
p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.694
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif5.89%
Number of Background Sequences with motif996.9
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets51.3 +/- 24.1bp
Average Position of motif in Background51.6 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCGAGYTCCC
CNGTCCTCCC
 A T G C A T G C T C A G G T C A A T C G A G C T A C G T A G T C A T G C A G T C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGAGYTCCC
GAGSCCGAGC----
 A C G T A C G T A C G T A C G T A T G C A T G C T C A G G T C A A T C G A G C T A C G T A G T C A T G C A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCGAGYTCCC
----GCTCCG
 A T G C A T G C T C A G G T C A A T C G A G C T A C G T A G T C A T G C A G T C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0058.1_Sfpi1_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCGAGYTCCC-----
-NNACTTCCTCTTNN
 A T G C A T G C T C A G G T C A A T C G A G C T A C G T A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCGAGYTCCC
GGGAATTTCC
 A T G C A T G C T C A G G T C A A T C G A G C T A C G T A G T C A T G C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

PB0124.1_Gabpa_2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCGAGYTCCC------
CCGTCTTCCCCCTCAC
 A T G C A T G C T C A G G T C A A T C G A G C T A C G T A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCGAGYTCCC------
GGGTGTGCCCAAAAGG
 A T G C A T G C T C A G G T C A A T C G A G C T A C G T A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CCGAGYTCCC--
------TCCCCA
 A T G C A T G C T C A G G T C A A T C G A G C T A C G T A G T C A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCGAGYTCCC----
NNNGGGGCGCCCCCNN
 A C G T A C G T A T G C A T G C T C A G G T C A A T C G A G C T A C G T A G T C A T G C A G T C A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCGAGYTCCC---
----CTGCCCGCA
 A T G C A T G C T C A G G T C A A T C G A G C T A C G T A G T C A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A