Information for 5-GCGAGTAAGTGCGGGC (Motif 26)

A C T G A G T C A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A C T G A G T C C G T A A G T C A C G T A C G T C G T A A G T C A C G T A G T C A C T G A G T C
p-value:1e-5
log p-value:-1.184e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 20.5bp
Average Position of motif in Background43.6 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCGAGTAAGTGCGGGC
----TTAAGTGC----
 A C T G A G T C A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCGAGTAAGTGCGGGC
-AGAGGAAGTG-----
 A C T G A G T C A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C T G A G T C
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCGAGTAAGTGCGGGC
----TTAAGTGGN---
 A C T G A G T C A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCGAGTAAGTGCGGGC
----TTAAGTGGT---
 A C T G A G T C A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GCGAGTAAGTGCGGGC-
-------TATGCGGGTA
 A C T G A G T C A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCGAGTAAGTGCGGGC
----TTAAGTGCTT--
 A C T G A G T C A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GCGAGTAAGTGCGGGC--
---------TNNGGGCAG
 A C T G A G T C A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCGAGTAAGTGCGGGC---
----ATAAGGGCGCGCGAT
 A C T G A G T C A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCGAGTAAGTGCGGGC---
----ATAAAGGCGCGCGAT
 A C T G A G T C A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCGAGTAAGTGCGGGC
--GGGTACGTGC----
 A C T G A G T C A C T G C G T A A C T G A C G T C G T A C G T A A C T G A C G T A C T G A G T C A C T G A C T G A C T G A G T C
A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T