Information for 10-CAACAACAAC (Motif 22)

T A G C C G T A T G C A T A G C C G T A C T G A A T G C C G T A C T G A A G T C
Reverse Opposite:
A C T G A G C T A C G T T A C G G A C T A C G T A T C G A C G T C G A T A T C G
p-value:1e-7
log p-value:-1.614e+01
Information Content per bp:1.829
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif106.3
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets49.5 +/- 19.1bp
Average Position of motif in Background48.2 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CAACAACAAC----
CAAACAACAACACCT
 A C G T T A G C C G T A T G C A T A G C C G T A C T G A A T G C C G T A C T G A A G T C A C G T A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CAACAACAAC--
ATGTCACAACAACAC
 A C G T A C G T A C G T T A G C C G T A T G C A T A G C C G T A C T G A A T G C C G T A C T G A A G T C A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CAACAACAAC--
AACAAACAACAAGAG
 A C G T A C G T A C G T T A G C C G T A T G C A T A G C C G T A C T G A A T G C C G T A C T G A A G T C A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CAACAACAAC--
--RNAACAATGG
 T A G C C G T A T G C A T A G C C G T A C T G A A T G C C G T A C T G A A G T C A C G T A C G T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAACAACAAC---
AAAAATAACAAACGG
 A C G T A C G T T A G C C G T A T G C A T A G C C G T A C T G A A T G C C G T A C T G A A G T C A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAACAACAAC
AAACCACANN
 T A G C C G T A T G C A T A G C C G T A C T G A A T G C C G T A C T G A A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CAACAACAAC
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A T G C A T A G C C G T A C T G A A T G C C G T A C T G A A G T C
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CAACAACAAC
NTTNAGAACAATTA-
 A C G T A C G T A C G T A C G T A C G T T A G C C G T A T G C A T A G C C G T A C T G A A T G C C G T A C T G A A G T C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAACAACAAC
AAACCACAGC
 T A G C C G T A T G C A T A G C C G T A C T G A A T G C C G T A C T G A A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAACAACAAC
----AACAAT
 T A G C C G T A T G C A T A G C C G T A C T G A A T G C C G T A C T G A A G T C
A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T