Information for 2-GAGAGGCAGTTGC (Motif 4)

A C T G C T G A A C T G C G T A A C T G A T C G A G T C C G T A A T C G A C G T C G A T A C T G A T G C
Reverse Opposite:
A T C G G T A C C G T A C G T A A T G C A C G T A C T G A T G C G T A C A C G T A G T C G A C T A G T C
p-value:1e-12
log p-value:-2.989e+01
Information Content per bp:1.861
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.1 +/- 17.1bp
Average Position of motif in Background47.9 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0149.1_Myb_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAGAGGCAGTTGC---
NNNTGGCAGTTGGTNN
 A C T G C T G A A C T G C G T A A C T G A T C G A G T C C G T A A T C G A C G T C G A T A C T G A T G C A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GAGAGGCAGTTGC
---TGGCAGTTGG
 A C T G C T G A A C T G C G T A A C T G A T C G A G T C C G T A A T C G A C G T C G A T A C T G A T G C
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGAGGCAGTTGC---
-CACGGCAGTTGGTNN
 A C T G C T G A A C T G C G T A A C T G A T C G A G T C C G T A A T C G A C G T C G A T A C T G A T G C A C G T A C G T A C G T
A C G T T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GAGAGGCAGTTGC
---TGGCAGTTGN
 A C T G C T G A A C T G C G T A A C T G A T C G A G T C C G T A A T C G A C G T C G A T A C T G A T G C
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAGAGGCAGTTGC
----GGCVGTTR-
 A C T G C T G A A C T G C G T A A C T G A T C G A G T C C G T A A T C G A C G T C G A T A C T G A T G C
A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGAGGCAGTTGC
-AGAGGAAGTG--
 A C T G C T G A A C T G C G T A A C T G A T C G A G T C C G T A A T C G A C G T C G A T A C T G A T G C
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAGAGGCAGTTGC-
-NGNGACAGCTGCN
 A C T G C T G A A C T G C G T A A C T G A T C G A G T C C G T A A T C G A C G T C G A T A C T G A T G C A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GAGAGGCAGTTGC-
----CGCAGCTGCG
 A C T G C T G A A C T G C G T A A C T G A T C G A G T C C G T A A T C G A C G T C G A T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GAGAGGCAGTTGC--
---SDGCAGGTGCNS
 A C T G C T G A A C T G C G T A A C T G A T C G A G T C C G T A A T C G A C G T C G A T A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GAGAGGCAGTTGC
---NNVCAGCTGB
 A C T G C T G A A C T G C G T A A C T G A T C G A G T C C G T A A T C G A C G T C G A T A C T G A T G C
A C G T A C G T A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G