Information for 2-CCAGGCGGAGGCAGAG (Motif 3)

G T A C A T G C C G T A A T C G A T C G G T A C A C T G A C T G T G C A A C T G A C T G A T G C C G T A A T C G C T G A A C T G
Reverse Opposite:
A G T C A G C T A T G C C G A T A T C G A G T C A G T C A C G T A G T C A G T C A C T G A T G C A T G C A C G T A T C G A C T G
p-value:1e-13
log p-value:-3.065e+01
Information Content per bp:1.801
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.5 +/- 23.6bp
Average Position of motif in Background56.6 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGCGGAGGCAGAG---
GCCASCAGGGGGCGCYVNNG
 A C G T G T A C A T G C C G T A A T C G A T C G G T A C A C T G A C T G T G C A A C T G A C T G A T G C C G T A A T C G C T G A A C T G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

EGR1/MA0162.2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCAGGCGGAGGCAGAG-
---GGCGGGGGCGGGGG
 G T A C A T G C C G T A A T C G A T C G G T A C A C T G A C T G T G C A A C T G A C T G A T G C C G T A A T C G C T G A A C T G A C G T
A C G T A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCAGGCGGAGGCAGAG
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G T A C A T G C C G T A A T C G A T C G G T A C A C T G A C T G T G C A A C T G A C T G A T G C C G T A A T C G C T G A A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGCGGAGGCAGAG-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G T A C A T G C C G T A A T C G A T C G G T A C A C T G A C T G T G C A A C T G A C T G A T G C C G T A A T C G C T G A A C T G A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGCGGAGGCAGAG
DCHCAGCAGGRGGCC---
 A C G T A C G T G T A C A T G C C G T A A T C G A T C G G T A C A C T G A C T G T G C A A C T G A C T G A T G C C G T A A T C G C T G A A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCAGGCGGAGGCAGAG
--AGCCTCAGGCA---
 G T A C A T G C C G T A A T C G A T C G G T A C A C T G A C T G T G C A A C T G A C T G A T G C C G T A A T C G C T G A A C T G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCAGGCGGAGGCAGAG
--AGCCTCAGGCA---
 G T A C A T G C C G T A A T C G A T C G G T A C A C T G A C T G T G C A A C T G A C T G A T G C C G T A A T C G C T G A A C T G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCAGGCGGAGGCAGAG----
YCAGGCWCAGTACCAGGCTC
 G T A C A T G C C G T A A T C G A T C G G T A C A C T G A C T G T G C A A C T G A C T G A T G C C G T A A T C G C T G A A C T G A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCAGGCGGAGGCAGAG
-----GGGCGGGAAGG
 G T A C A T G C C G T A A T C G A T C G G T A C A C T G A C T G T G C A A C T G A C T G A T G C C G T A A T C G C T G A A C T G
A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCAGGCGGAGGCAGAG
--NGCCTGAGGCN---
 G T A C A T G C C G T A A T C G A T C G G T A C A C T G A C T G T G C A A C T G A C T G A T G C C G T A A T C G C T G A A C T G
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T