Information for 14-TCTCTCACACACA (Motif 27)

A C G T A G T C A C G T A T G C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A C T G C G A T A C T G C G T A A T C G C G T A A C T G G T C A
p-value:1e-5
log p-value:-1.176e+01
Information Content per bp:1.913
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.0 +/- 22.3bp
Average Position of motif in Background55.4 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCTCTCACACACA
---CRCCCACGCA
 A C G T A G T C A C G T A T G C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCACACACA
GSCTGTCACTCA--
 A C G T A C G T A G T C A C G T A T G C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCTCTCACACACA---
AGCGGCACACACGCAA
 A C G T A G T C A C G T A T G C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCTCTCACACACA
NCTGTCAATCAN-
 A C G T A G T C A C G T A T G C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TCTCTCACACACA
----TCACACCT-
 A C G T A G T C A C G T A T G C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCTCTCACACACA-----
--CGAAGCACACAAAATA
 A C G T A G T C A C G T A T G C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTCACACACA
TGTCTGDCACCT---
 A C G T A C G T A C G T A G T C A C G T A T G C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCTCTCACACACA
---GCCACACCCA
 A C G T A G T C A C G T A T G C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCTCTCACACACA
CTGTCTGTCACCT---
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TCTCTCACACACA-
----TBGCACGCAA
 A C G T A G T C A C G T A T G C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A