Information for 5-CAGGGCACCCTTC (Motif 12)

A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A T G C C G A T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A T C G A C T G A C T G C G A T A C T G A G T C A G T C A G T C C G A T A C T G
p-value:1e-10
log p-value:-2.484e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 22.0bp
Average Position of motif in Background52.0 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAGGGCACCCTTC
WDNCTGGGCA------
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A T G C C G A T A C G T A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAGGGCACCCTTC---
--NNGCACCTTTCTCC
 A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A T G C C G A T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGCACCCTTC-
NNNGGGGCGCCCCCNN
 A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A T G C C G A T A C G T A G T C A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAGGGCACCCTTC
NNNNTTGGGCACNNCN-
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A T G C C G A T A C G T A G T C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGCACCCTTC
NGTGGGCAT-----
 A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A T G C C G A T A C G T A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CAGGGCACCCTTC
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A T G C C G A T A C G T A G T C
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGGGCACCCTTC
---GGCGCGCT--
 A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A T G C C G A T A C G T A G T C
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGCACCCTTC
TNNGGGCAG-----
 A C G T A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A T G C C G A T A C G T A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CAGGGCACCCTTC
----GCTCCG---
 A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A T G C C G A T A C G T A G T C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAGGGCACCCTTC
AAGGTCAC-----
 A G T C C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A T G C C G A T A C G T A G T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T