Information for 4-CATCWTGGCG (Motif 11)

A G T C C G T A A C G T A T G C C G T A A C G T A T C G A T C G A G T C A C T G
Reverse Opposite:
T G A C A C T G A T G C A T G C C G T A C G A T A T C G G T C A C G A T A C T G
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.772
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.40%
Number of Background Sequences with motif559.6
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets48.6 +/- 27.3bp
Average Position of motif in Background51.8 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CATCWTGGCG--
CAAGATGGCGGC
 A G T C C G T A A C G T A T G C C G T A A C G T A T C G A T C G A G T C A C T G A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CATCWTGGCG--
CAAGATGGCGGC
 A G T C C G T A A C G T A T G C C G T A A C G T A T C G A T C G A G T C A C T G A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CATCWTGGCG--
---NTTGGCANN
 A G T C C G T A A C G T A T G C C G T A A C G T A T C G A T C G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CATCWTGGCG
----TTGGCA
 A G T C C G T A A C G T A T G C C G T A A C G T A T C G A T C G A G T C A C T G
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CATCWTGGCG---
--TAATGGCGGNC
 A G T C C G T A A C G T A T G C C G T A A C G T A T C G A T C G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATCWTGGCG-------
NNNNTTGGCGCCGANNN
 A G T C C G T A A C G T A T G C C G T A A C G T A T C G A T C G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CATCWTGGCG-------
NNNNTTGGCGCCGANNN
 A G T C C G T A A C G T A T G C C G T A A C G T A T C G A T C G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CATCWTGGCG-------
NAGANTGGCGGGGNGNA
 A G T C C G T A A C G T A T G C C G T A A C G T A T C G A T C G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CATCWTGGCG
ATTGCATCAT----
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A T G C C G T A A C G T A T C G A T C G A G T C A C T G
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CATCWTGGCG--
--NNTTGGCANN
 A G T C C G T A A C G T A T G C C G T A A C G T A T C G A T C G A G T C A C T G A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C