Information for 2-TTSTCCTTGKWRGGSR (Motif 3)

C G A T A C G T A T G C A C G T A T G C A G T C A G C T A C G T A C T G A C T G C G T A C T G A A C T G A C T G A T C G C T A G
Reverse Opposite:
A G T C A T G C A G T C A G T C A G C T C G A T G T A C A G T C C G T A C T G A C T A G A T C G C G T A A T C G C G T A C G T A
p-value:1e-13
log p-value:-3.092e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 27.6bp
Average Position of motif in Background23.8 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTSTCCTTGKWRGGSR
BNTGDCCTTG-------
 A C G T C G A T A C G T A T G C A C G T A T G C A G T C A G C T A C G T A C T G A C T G C G T A C T G A A C T G A C T G A T C G C T A G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTSTCCTTGKWRGGSR
-TGACCTTGAV-----
 C G A T A C G T A T G C A C G T A T G C A G T C A G C T A C G T A C T G A C T G C G T A C T G A A C T G A C T G A T C G C T A G
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTSTCCTTGKWRGGSR
-TGACCTTGAN-----
 C G A T A C G T A T G C A C G T A T G C A G T C A G C T A C G T A C T G A C T G C G T A C T G A A C T G A C T G A T C G C T A G
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTSTCCTTGKWRGGSR
NTGACCTTGA------
 C G A T A C G T A T G C A C G T A T G C A G T C A G C T A C G T A C T G A C T G C G T A C T G A A C T G A C T G A T C G C T A G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTSTCCTTGKWRGGSR
ATGACCTTGA------
 C G A T A C G T A T G C A C G T A T G C A G T C A G C T A C G T A C T G A C T G C G T A C T G A A C T G A C T G A T C G C T A G
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTSTCCTTGKWRGGSR
NATGACCTTGA------
 A C G T C G A T A C G T A T G C A C G T A T G C A G T C A G C T A C G T A C T G A C T G C G T A C T G A A C T G A C T G A T C G C T A G
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTSTCCTTGKWRGGSR
NNNNATGACCTTGANTN---
 A C G T A C G T A C G T A C G T C G A T A C G T A T G C A C G T A T G C A G T C A G C T A C G T A C T G A C T G C G T A C T G A A C T G A C T G A T C G C T A G
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTSTCCTTGKWRGGSR
--TNCCATATATGG--
 C G A T A C G T A T G C A C G T A T G C A G T C A G C T A C G T A C T G A C T G C G T A C T G A A C T G A C T G A T C G C T A G
A C G T A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTSTCCTTGKWRGGSR
ATGACCTTGAA-----
 C G A T A C G T A T G C A C G T A T G C A G T C A G C T A C G T A C T G A C T G C G T A C T G A A C T G A C T G A T C G C T A G
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TTSTCCTTGKWRGGSR
GTGACCTT--------
 C G A T A C G T A T G C A C G T A T G C A G T C A G C T A C G T A C T G A C T G C G T A C T G A A C T G A C T G A T C G C T A G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T