Information for 6-CGGCTCCTCT (Motif 16)

T A G C A C T G T C A G A T G C C A G T A G T C G T A C G A C T G A T C A C G T
Reverse Opposite:
T G C A C T A G C T G A C A T G T C A G G T C A T A C G A G T C T G A C A T C G
p-value:1e-7
log p-value:-1.829e+01
Information Content per bp:1.545
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif444.2
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets45.5 +/- 23.3bp
Average Position of motif in Background50.9 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGCTCCTCT----
NNGCACCTTTCTCC
 T A G C A C T G T C A G A T G C C A G T A G T C G T A C G A C T G A T C A C G T A C G T A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CGGCTCCTCT----
----NSCACTYVAV
 T A G C A C T G T C A G A T G C C A G T A G T C G T A C G A C T G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGCTCCTCT
--GCTCCG--
 T A G C A C T G T C A G A T G C C A G T A G T C G T A C G A C T G A T C A C G T
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGGCTCCTCT---
---AASCACTCAA
 T A G C A C T G T C A G A T G C C A G T A G T C G T A C G A C T G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGGCTCCTCT--
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C G T T A G C A C T G T C A G A T G C C A G T A G T C G T A C G A C T G A T C A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGGCTCCTCT
---TTCCTCT
 T A G C A C T G T C A G A T G C C A G T A G T C G T A C G A C T G A T C A C G T
A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTCCTCT--
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A C G T T A G C A C T G T C A G A T G C C A G T A G T C G T A C G A C T G A T C A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGGCTCCTCT----
----RSCACTYRAG
 T A G C A C T G T C A G A T G C C A G T A G T C G T A C G A C T G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGGCTCCTCT-
-CNGTCCTCCC
 T A G C A C T G T C A G A T G C C A G T A G T C G T A C G A C T G A T C A C G T A C G T
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

PB0203.1_Zfp691_2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CGGCTCCTCT---
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A C G T T A G C A C T G T C A G A T G C C A G T A G T C G T A C G A C T G A T C A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C