Information for 5-CATCATGGCG (Motif 13)

A G T C C T G A C G A T A T G C T C G A A C G T A T C G A T C G A G T C A C T G
Reverse Opposite:
A G T C A C T G A T G C A T G C C G T A A G C T A T C G G C T A G A C T A C T G
p-value:1e-8
log p-value:-1.946e+01
Information Content per bp:1.847
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif81.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets49.0 +/- 28.5bp
Average Position of motif in Background53.8 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CATCATGGCG---
--TAATGGCGGNC
A G T C C T G A C G A T A T G C T C G A A C G T A T C G A T C G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CATCATGGCG--
CAAGATGGCGGC
A G T C C T G A C G A T A T G C T C G A A C G T A T C G A T C G A G T C A C T G A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CATCATGGCG--
CAAGATGGCGGC
A G T C C T G A C G A T A T G C T C G A A C G T A T C G A T C G A G T C A C T G A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATCATGGCG-------
NNNNTTGGCGCCGANNN
A G T C C T G A C G A T A T G C T C G A A C G T A T C G A T C G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATCATGGCG-------
NAGANTGGCGGGGNGNA
A G T C C T G A C G A T A T G C T C G A A C G T A T C G A T C G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATCATGGCG-------
NNNNTTGGCGCCGANNN
A G T C C T G A C G A T A T G C T C G A A C G T A T C G A T C G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CATCATGGCG
-GTCATN---
A G T C C T G A C G A T A T G C T C G A A C G T A T C G A T C G A G T C A C T G
A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATCATGGCG-----
GCTTCGTGGGGGGTCT
A C G T A G T C C T G A C G A T A T G C T C G A A C G T A T C G A T C G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CATCATGGCG
ATTGCATCAT----
A C G T A C G T A C G T A C G T A G T C C T G A C G A T A T G C T C G A A C G T A T C G A T C G A G T C A C T G
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CATCATGGCG
ATTGCATCAK----
A C G T A C G T A C G T A C G T A G T C C T G A C G A T A T G C T C G A A C G T A T C G A T C G A G T C A C T G
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T