Information for 3-TCACTCACCG (Motif 10)

A G C T A G T C C G T A A G T C G C A T A G T C C G T A A T G C A G T C A C T G
Reverse Opposite:
A G T C A C T G A T C G C G A T A C T G C G T A A C T G C G A T A C T G T C G A
p-value:1e-9
log p-value:-2.117e+01
Information Content per bp:1.864
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif85.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets55.1 +/- 19.5bp
Average Position of motif in Background52.3 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCACTCACCG
AGCCACTCAAG-
A C G T A C G T A G C T A G T C C G T A A G T C G C A T A G T C C G T A A T G C A G T C A C T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCACTCACCG-
NNACTTACCTN
A G C T A G T C C G T A A G T C G C A T A G T C C G T A A T G C A G T C A C T G A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCACTCACCG
SCTGTCAVTCAV--
A C G T A C G T A C G T A C G T A G C T A G T C C G T A A G T C G C A T A G T C C G T A A T G C A G T C A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCACTCACCG
NCTGTCAATCAN--
A C G T A C G T A C G T A C G T A G C T A G T C C G T A A G T C G C A T A G T C C G T A A T G C A G T C A C T G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCACTCACCG----
ACCACTCTCGGTCAC
A C G T A G C T A G T C C G T A A G T C G C A T A G T C C G T A A T G C A G T C A C T G A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCACTCACCG
MRSCACTYAA--
A C G T A C G T A G C T A G T C C G T A A G T C G C A T A G T C C G T A A T G C A G T C A C T G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCACTCACCG
NATGAGTCACC-
A C G T A C G T A G C T A G T C C G T A A G T C G C A T A G T C C G T A A T G C A G T C A C T G
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCACTCACCG
GSCTGTCACTCA---
A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A G T C G C A T A G T C C G T A A T G C A G T C A C T G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCACTCACCG
ATGAGTCATCN
A C G T A G C T A G T C C G T A A G T C G C A T A G T C C G T A A T G C A G T C A C T G
T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCACTCACCG
-CACGCA---
A G C T A G T C C G T A A G T C G C A T A G T C C G T A A T G C A G T C A C T G
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T