Information for 4-TGAAGAATTGTTC (Motif 9)

A C G T A C T G C T G A C G T A A T C G G T C A G T C A A C G T A C G T C T A G A C G T G A C T A G T C
Reverse Opposite:
C T A G C T G A G T C A A G T C G T C A T G C A A C G T A C G T A T G C C G A T G A C T A G T C C G T A
p-value:1e-10
log p-value:-2.432e+01
Information Content per bp:1.775
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.5 +/- 18.1bp
Average Position of motif in Background57.3 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0074.1_Sox8_1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGAAGAATTGTTC----
GTATCTATTGTTCTTTA
 A C G T A C T G C T G A C G T A A T C G G T C A G T C A A C G T A C G T C T A G A C G T G A C T A G T C A C G T A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0066.1_Sox17_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGAAGAATTGTTC--
NNATNAATTGTTTNN
 A C G T A C T G C T G A C G T A A T C G G T C A G T C A A C G T A C G T C T A G A C G T G A C T A G T C A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGAAGAATTGTTC-----
-AATCAATTGTTCCGCTA
 A C G T A C T G C T G A C G T A A T C G G T C A G T C A A C G T A C G T C T A G A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGAAGAATTGTTC----
GGAAAAATTGTTAGGAA
 A C G T A C T G C T G A C G T A A T C G G T C A G T C A A C G T A C G T C T A G A C G T G A C T A G T C A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGAAGAATTGTTC----
-AANTTATTGTTCTNNA
 A C G T A C T G C T G A C G T A A T C G G T C A G T C A A C G T A C G T C T A G A C G T G A C T A G T C A C G T A C G T A C G T A C G T
A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGAAGAATTGTTC----
---AAAATTGTTATGAA
 A C G T A C T G C T G A C G T A A T C G G T C A G T C A A C G T A C G T C T A G A C G T G A C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGAAGAATTGTTC-----
--TTCAATTGTTCTAAAA
 A C G T A C T G C T G A C G T A A T C G G T C A G T C A A C G T A C G T C T A G A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TGAAGAATTGTTC
------ATTGTTA
 A C G T A C T G C T G A C G T A A T C G G T C A G T C A A C G T A C G T C T A G A C G T G A C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGAAGAATTGTTC
----CCATTGTTC
 A C G T A C T G C T G A C G T A A T C G G T C A G T C A A C G T A C G T C T A G A C G T G A C T A G T C
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TGAAGAATTGTTC
------ATTGTT-
 A C G T A C T G C T G A C G T A A T C G G T C A G T C A A C G T A C G T C T A G A C G T G A C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T