Information for 5-CACTGASTAAAGTAGC (Motif 6)

A T G C C G T A A G T C C G A T A C T G C G T A A T G C A G C T G T C A C G T A C G T A A C T G C A G T C T G A T A C G A G T C
Reverse Opposite:
C T A G A G T C A G C T G T C A G T A C A C G T G A C T A C G T T C G A A T C G C G A T A G T C C G T A A C T G C G A T A T C G
p-value:1e-11
log p-value:-2.642e+01
Information Content per bp:1.698
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif17.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.1 +/- 18.3bp
Average Position of motif in Background48.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACTGASTAAAGTAGC
ACCACTTAA---------
 A C G T A C G T A T G C C G T A A G T C C G A T A C T G C G T A A T G C A G C T G T C A C G T A C G T A A C T G C A G T C T G A T A C G A G T C
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACTGASTAAAGTAGC
ACCACTTAA---------
 A C G T A C G T A T G C C G T A A G T C C G A T A C T G C G T A A T G C A G C T G T C A C G T A C G T A A C T G C A G T C T G A T A C G A G T C
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CACTGASTAAAGTAGC
RGGGCACTAACY--------
 A C G T A C G T A C G T A C G T A T G C C G T A A G T C C G A T A C T G C G T A A T G C A G C T G T C A C G T A C G T A A C T G C A G T C T G A T A C G A G T C
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CACTGASTAAAGTAGC
AAGCACTTAA---------
 A C G T A C G T A C G T A T G C C G T A A G T C C G A T A C T G C G T A A T G C A G C T G T C A C G T A C G T A A C T G C A G T C T G A T A C G A G T C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACTGASTAAAGTAGC-
NANAGATCAAAGGGNNN
 A T G C C G T A A G T C C G A T A C T G C G T A A T G C A G C T G T C A C G T A C G T A A C T G C A G T C T G A T A C G A G T C A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACTGASTAAAGTAGC-
NNNAGATCAAAGGANNN
 A T G C C G T A A G T C C G A T A C T G C G T A A T G C A G C T G T C A C G T A C G T A A C T G C A G T C T G A T A C G A G T C A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CACTGASTAAAGTAGC----
----ATGTACAGTAGCAAAG
 A T G C C G T A A G T C C G A T A C T G C G T A A T G C A G C T G T C A C G T A C G T A A C T G C A G T C T G A T A C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CACTGASTAAAGTAGC
CATAACCACTTAACAAC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A G T C C G A T A C T G C G T A A T G C A G C T G T C A C G T A C G T A A C T G C A G T C T G A T A C G A G T C
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CACTGASTAAAGTAGC
MRSCACTYAA---------
 A C G T A C G T A C G T A T G C C G T A A G T C C G A T A C T G C G T A A T G C A G C T G T C A C G T A C G T A A C T G C A G T C T G A T A C G A G T C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CACTGASTAAAGTAGC
GCACTTAA---------
 A C G T A T G C C G T A A G T C C G A T A C T G C G T A A T G C A G C T G T C A C G T A C G T A A C T G C A G T C T G A T A C G A G T C
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T