Information for 8-RYCMTGCKGMGGTCSC (Motif 12)

C T A G A G T C A G T C G T A C A C G T A C T G A G T C A C G T A C T G G T A C C T A G A C T G A C G T A G T C A T C G A G T C
Reverse Opposite:
A C T G T A G C A C T G C G T A A G T C A G T C A C T G A G T C G T C A C T A G A G T C C G T A A C T G A C T G C T A G G A T C
p-value:1e-9
log p-value:-2.295e+01
Information Content per bp:1.845
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.6 +/- 22.7bp
Average Position of motif in Background57.0 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RYCMTGCKGMGGTCSC
NNTCCTGCTGTGNNN--
 A C G T C T A G A G T C A G T C G T A C A C G T A C T G A G T C A C G T A C T G G T A C C T A G A C T G A C G T A G T C A T C G A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RYCMTGCKGMGGTCSC
CCCCCTGCTGTG-----
 A C G T C T A G A G T C A G T C G T A C A C G T A C T G A G T C A C G T A C T G G T A C C T A G A C T G A C G T A G T C A T C G A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:RYCMTGCKGMGGTCSC
--CCTGCTGAGH----
 C T A G A G T C A G T C G T A C A C G T A C T G A G T C A C G T A C T G G T A C C T A G A C T G A C G T A G T C A T C G A G T C
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-RYCMTGCKGMGGTCSC
TCNCCTGCTGNGNNN--
 A C G T C T A G A G T C A G T C G T A C A C G T A C T G A G T C A C G T A C T G G T A C C T A G A C T G A C G T A G T C A T C G A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---RYCMTGCKGMGGTCSC
GGCCYCCTGCTGDGH----
 A C G T A C G T A C G T C T A G A G T C A G T C G T A C A C G T A C T G A G T C A C G T A C T G G T A C C T A G A C T G A C G T A G T C A T C G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-RYCMTGCKGMGGTCSC
TNTCCTGCTGTGNNG--
 A C G T C T A G A G T C A G T C G T A C A C G T A C T G A G T C A C G T A C T G G T A C C T A G A C T G A C G T A G T C A T C G A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:RYCMTGCKGMGGTCSC-
-----TCGGTGGTCGCN
 C T A G A G T C A G T C G T A C A C G T A C T G A G T C A C G T A C T G G T A C C T A G A C T G A C G T A G T C A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:RYCMTGCKGMGGTCSC
----TTCGGTGGTCGC
 C T A G A G T C A G T C G T A C A C G T A C T G A G T C A C G T A C T G G T A C C T A G A C T G A C G T A G T C A T C G A G T C
A C G T A C G T A C G T A C G T C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:RYCMTGCKGMGGTCSC
----NTCGGTGGTCGC
 C T A G A G T C A G T C G T A C A C G T A C T G A G T C A C G T A C T G G T A C C T A G A C T G A C G T A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:RYCMTGCKGMGGTCSC
----CAGTGTGGTCGC
 C T A G A G T C A G T C G T A C A C G T A C T G A G T C A C G T A C T G G T A C C T A G A C T G A C G T A G T C A T C G A G T C
A C G T A C G T A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C