Information for 4-TTTCATTCACTCAGTA (Motif 4)

A G C T A C G T A C G T A T G C C G T A A G C T A G C T A G T C C T G A A T G C C G A T G T A C C T G A A C T G C A G T C T G A
Reverse Opposite:
G A C T G T C A T G A C G A C T A C T G C G T A A T C G A G C T A C T G C T G A T C G A C G A T A T C G T C G A C G T A C T G A
p-value:1e-13
log p-value:-3.035e+01
Information Content per bp:1.709
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 21.4bp
Average Position of motif in Background45.7 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTCATTCACTCAGTA
NNCATTCATTCATNNN---
 A C G T A C G T A C G T A G C T A C G T A C G T A T G C C G T A A G C T A G C T A G T C C T G A A T G C C G A T G T A C C T G A A C T G C A G T C T G A
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTTCATTCACTCAGTA
--NCTGTCAATCAN--
 A G C T A C G T A C G T A T G C C G T A A G C T A G C T A G T C C T G A A T G C C G A T G T A C C T G A A C T G C A G T C T G A
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTTCATTCACTCAGTA
--TGAGTCA-------
 A G C T A C G T A C G T A T G C C G T A A G C T A G C T A G T C C T G A A T G C C G A T G T A C C T G A A C T G C A G T C T G A
A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTTCATTCACTCAGTA
--SCTGTCAVTCAV--
 A G C T A C G T A C G T A T G C C G T A A G C T A G C T A G T C C T G A A T G C C G A T G T A C C T G A A C T G C A G T C T G A
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TTTCATTCACTCAGTA
-GSCTGTCACTCA---
 A G C T A C G T A C G T A T G C C G T A A G C T A G C T A G T C C T G A A T G C C G A T G T A C C T G A A C T G C A G T C T G A
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTTCATTCACTCAGTA
-----TTCACACCTT-
 A G C T A C G T A C G T A T G C C G T A A G C T A G C T A G T C C T G A A T G C C G A T G T A C C T G A A C T G C A G T C T G A
A C G T A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TTTCATTCACTCAGTA
----MRSCACTYAA--
 A G C T A C G T A C G T A T G C C G T A A G C T A G C T A G T C C T G A A T G C C G A T G T A C C T G A A C T G C A G T C T G A
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:TTTCATTCACTCAGTA
------TCAGTCTT--
 A G C T A C G T A C G T A T G C C G T A A G C T A G C T A G T C C T G A A T G C C G A T G T A C C T G A A C T G C A G T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCATTCACTCAGTA
TNGAATTTCATTNAN------
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A T G C C G T A A G C T A G C T A G T C C T G A A T G C C G A T G T A C C T G A A C T G C A G T C T G A
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TTTCATTCACTCAGTA
NATGAGTCACC-----
 A G C T A C G T A C G T A T G C C G T A A G C T A G C T A G T C C T G A A T G C C G A T G T A C C T G A A C T G C A G T C T G A
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T A C G T