Information for 6-MARKGYYTGAAMTTMM (Motif 9)

G T A C C G T A C T A G A C G T A C T G A G C T A G T C C G A T A C T G C G T A C T G A G T C A C G A T G C A T G T A C G T A C
Reverse Opposite:
A C T G A C T G C G T A C G T A C A G T A G C T A C G T G T A C C G T A T C A G C T G A G T A C G T A C A G T C A C G T A C T G
p-value:1e-12
log p-value:-2.834e+01
Information Content per bp:1.795
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 21.4bp
Average Position of motif in Background26.1 +/- 2.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--MARKGYYTGAAMTTMM
GAAAAGGTGTGAAAATT-
 A C G T A C G T G T A C C G T A C T A G A C G T A C T G A G C T A G T C C G A T A C T G C G T A C T G A G T C A C G A T G C A T G T A C G T A C
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:MARKGYYTGAAMTTMM
-AAGGTGTGAAAAT--
 G T A C C G T A C T A G A C G T A C T G A G C T A G T C C G A T A C T G C G T A C T G A G T C A C G A T G C A T G T A C G T A C
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:MARKGYYTGAAMTTMM
-AAGGTGTGAA-----
 G T A C C G T A C T A G A C G T A C T G A G C T A G T C C G A T A C T G C G T A C T G A G T C A C G A T G C A T G T A C G T A C
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:MARKGYYTGAAMTTMM
--AGGTGTGAAA----
 G T A C C G T A C T A G A C G T A C T G A G C T A G T C C G A T A C T G C G T A C T G A G T C A C G A T G C A T G T A C G T A C
A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:MARKGYYTGAAMTTMM
-AAGGTGTGAAA----
 G T A C C G T A C T A G A C G T A C T G A G C T A G T C C G A T A C T G C G T A C T G A G T C A C G A T G C A T G T A C G T A C
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:MARKGYYTGAAMTTMM-
--TTGAATGAAATTCGA
 G T A C C G T A C T A G A C G T A C T G A G C T A G T C C G A T A C T G C G T A C T G A G T C A C G A T G C A T G T A C G T A C A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:MARKGYYTGAAMTTMM
-TAGGTGTGAAG----
 G T A C C G T A C T A G A C G T A C T G A G C T A G T C C G A T A C T G C G T A C T G A G T C A C G A T G C A T G T A C G T A C
A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:MARKGYYTGAAMTTMM-
-------GGAAATTCCC
 G T A C C G T A C T A G A C G T A C T G A G C T A G T C C G A T A C T G C G T A C T G A G T C A C G A T G C A T G T A C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:MARKGYYTGAAMTTMM
-AAGGTGTKAA-----
 G T A C C G T A C T A G A C G T A C T G A G C T A G T C C G A T A C T G C G T A C T G A G T C A C G A T G C A T G T A C G T A C
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:MARKGYYTGAAMTTMM
-----TTTGAAACCG-
 G T A C C G T A C T A G A C G T A C T G A G C T A G T C C G A T A C T G C G T A C T G A G T C A C G A T G C A T G T A C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T