Information for 3-AAATCATCATATTGTG (Motif 6)

T G C A G T C A C G T A A G C T T A G C C G T A A C G T G T A C C G T A A G C T T C G A C G A T A C G T A T C G C G A T T A C G
Reverse Opposite:
A G T C C G T A A T G C T G C A C G T A A C G T T C G A A C G T C A T G G T C A C G A T A C T G T C G A A C G T C A G T A C G T
p-value:1e-12
log p-value:-2.931e+01
Information Content per bp:1.668
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif88.7
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets52.1 +/- 26.1bp
Average Position of motif in Background49.1 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAATCATCATATTGTG
-AACAATAACATTGTT
 T G C A G T C A C G T A A G C T T A G C C G T A A C G T G T A C C G T A A G C T T C G A C G A T A C G T A T C G C G A T T A C G
A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:forward strand
Alignment:AAATCATCATATTGTG
-------CTCATTGTC
 T G C A G T C A C G T A A G C T T A G C C G T A A C G T G T A C C G T A A G C T T C G A C G A T A C G T A T C G C G A T T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

OLIG3/MA0827.1/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AAATCATCATATTGTG
-----ANCATATGGT-
 T G C A G T C A C G T A A G C T T A G C C G T A A C G T G T A C C G T A A G C T T C G A C G A T A C G T A T C G C G A T T A C G
A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AAATCATCATATTGTG
-----ACCATATGGT-
 T G C A G T C A C G T A A G C T T A G C C G T A A C G T G T A C C G T A A G C T T C G A C G A T A C G T A T C G C G A T T A C G
A C G T A C G T A C G T A C G T A C G T C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AAATCATCATATTGTG
-----AACATATGTT-
 T G C A G T C A C G T A A G C T T A G C C G T A A C G T G T A C C G T A A G C T T C G A C G A T A C G T A T C G C G A T T A C G
A C G T A C G T A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AAATCATCATATTGTG
-----ANCATATGGT-
 T G C A G T C A C G T A A G C T T A G C C G T A A C G T G T A C C G T A A G C T T C G A C G A T A C G T A T C G C G A T T A C G
A C G T A C G T A C G T A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAATCATCATATTGTG
TATAATTATAATATTC--
 A C G T A C G T T G C A G T C A C G T A A G C T T A G C C G T A A C G T G T A C C G T A A G C T T C G A C G A T A C G T A T C G C G A T T A C G
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AAATCATCATATTGTG
-----ACCATATGGT-
 T G C A G T C A C G T A A G C T T A G C C G T A A C G T G T A C C G T A A G C T T C G A C G A T A C G T A T C G C G A T T A C G
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AAATCATCATATTGTG
----AAACATATGTTT
 T G C A G T C A C G T A A G C T T A G C C G T A A C G T G T A C C G T A A G C T T C G A C G A T A C G T A T C G C G A T T A C G
A C G T A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AAATCATCATATTGTG-
-----AACAGATGGTCN
 T G C A G T C A C G T A A G C T T A G C C G T A A C G T G T A C C G T A A G C T T C G A C G A T A C G T A T C G C G A T T A C G A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G