Information for 2-CCACCAGGGGGCG (Motif 5)

A G T C G T A C C T G A A T G C T A G C C G T A A T C G C T A G A C T G A C T G A C T G G T A C A T C G
Reverse Opposite:
A T G C C A T G A G T C A G T C G T A C A G T C T A G C C G A T A T C G A T C G A G C T A C T G A C T G
p-value:1e-12
log p-value:-2.945e+01
Information Content per bp:1.800
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.8 +/- 23.1bp
Average Position of motif in Background47.1 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGGGGGCG------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C G T A C C T G A A T G C T A G C C G T A A T C G C T A G A C T G A C T G A C T G G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---CCACCAGGGGGCG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C G T A C C T G A A T G C T A G C C G T A A T C G C T A G A C T G A C T G A C T G G T A C A T C G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CCACCAGGGGGCG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C G T A C C T G A A T G C T A G C C G T A A T C G C T A G A C T G A C T G A C T G G T A C A T C G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCACCAGGGGGCG-----
-NNNAAGGGGGCGGGNNN
 A G T C G T A C C T G A A T G C T A G C C G T A A T C G C T A G A C T G A C T G A C T G G T A C A T C G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGGGGGCG
CCCCCCCGGGGGNN
 A C G T A G T C G T A C C T G A A T G C T A G C C G T A A T C G C T A G A C T G A C T G A C T G G T A C A T C G
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGGGGGCG
NCCCCCCCGGGGGGN
 A C G T A C G T A G T C G T A C C T G A A T G C T A G C C G T A A T C G C T A G A C T G A C T G A C T G G T A C A T C G
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGGGGGCG
ACCCCCCCGGGGGGN
 A C G T A C G T A G T C G T A C C T G A A T G C T A G C C G T A A T C G C T A G A C T G A C T G A C T G G T A C A T C G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

KLF13/MA0657.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCACCAGGGGGCG------
-CAAAAAGGGGCGTGGCAT
 A G T C G T A C C T G A A T G C T A G C C G T A A T C G C T A G A C T G A C T G A C T G G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCACCAGGGGGCG
-TGTCAGGGGGCG
 A G T C G T A C C T G A A T G C T A G C C G T A A T C G C T A G A C T G A C T G A C T G G T A C A T C G
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCACCAGGGGGCG-
TCACCTCTGGGCAG
 A G T C G T A C C T G A A T G C T A G C C G T A A T C G C T A G A C T G A C T G A C T G G T A C A T C G A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G