Information for 1-MCRRAMGCCARTY (Motif 4)

G T C A A G T C C T G A C T A G G T C A G T C A A C T G A G T C A G T C C G T A C T A G A C G T A G T C
Reverse Opposite:
C T A G C G T A A G T C C G A T A C T G A C T G A G T C A C G T A C G T A G T C A G C T C T A G A C G T
p-value:1e-12
log p-value:-2.967e+01
Information Content per bp:1.816
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.4 +/- 23.2bp
Average Position of motif in Background52.2 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:MCRRAMGCCARTY
-----TGCCAA--
 G T C A A G T C C T G A C T A G G T C A G T C A A C T G A G T C A G T C C G T A C T A G A C G T A G T C
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:forward strand
Alignment:MCRRAMGCCARTY--
-----AGCCAATCGG
 G T C A A G T C C T G A C T A G G T C A G T C A A C T G A G T C A G T C C G T A C T A G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:MCRRAMGCCARTY
---CGTGCCAAG-
 G T C A A G T C C T G A C T A G G T C A G T C A A C T G A G T C A G T C C G T A C T A G A C G T A G T C
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:MCRRAMGCCARTY-
--ACTAGCCAATCA
 G T C A A G T C C T G A C T A G G T C A G T C A A C T G A G T C A G T C C G T A C T A G A C G T A G T C A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:MCRRAMGCCARTY--
AGGGAAGTCATTTCT
 G T C A A G T C C T G A C T A G G T C A G T C A A C T G A G T C A G T C C G T A C T A G A C G T A G T C A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:MCRRAMGCCARTY
-CAAAGGTCAG--
 G T C A A G T C C T G A C T A G G T C A G T C A A C T G A G T C A G T C C G T A C T A G A C G T A G T C
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:MCRRAMGCCARTY-
----ATGCCAGACN
 G T C A A G T C C T G A C T A G G T C A G T C A A C T G A G T C A G T C C G T A C T A G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:MCRRAMGCCARTY
--AAAAGTCAA--
 G T C A A G T C C T G A C T A G G T C A G T C A A C T G A G T C A G T C C G T A C T A G A C G T A G T C
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:MCRRAMGCCARTY--
AAATGGACCAATCAG
 G T C A A G T C C T G A C T A G G T C A G T C A A C T G A G T C A G T C C G T A C T A G A C G T A G T C A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:MCRRAMGCCARTY
----ATGCCAACC
 G T C A A G T C C T G A C T A G G T C A G T C A A C T G A G T C A G T C C G T A C T A G A C G T A G T C
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C