Information for 20-GCGCACGTGAGCG (Motif 31)

A C T G A T G C A C T G A G T C C G T A A G T C A C T G A C G T A C T G G T C A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A G T C G T C A A G T C A C T G A C G T A C T G G T A C A T C G A G T C
p-value:1e-6
log p-value:-1.475e+01
Information Content per bp:1.934
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.5 +/- 26.6bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Id2/MA0617.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GCGCACGTGAGCG
--GCACGTGA---
 A C T G A T G C A C T G A G T C C G T A A G T C A C T G A C G T A C T G G T C A A C T G A G T C A C T G
A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GCGCACGTGAGCG
--KCACGTGMCN-
 A C T G A T G C A C T G A G T C C G T A A G T C A C T G A C G T A C T G G T C A A C T G A G T C A C T G
A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCGCACGTGAGCG
-GTCACGTGAN--
 A C T G A T G C A C T G A G T C C G T A A G T C A C T G A C G T A C T G G T C A A C T G A G T C A C T G
A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GCGCACGTGAGCG
--NCACGTGACN-
 A C T G A T G C A C T G A G T C C G T A A G T C A C T G A C G T A C T G G T C A A C T G A G T C A C T G
A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GCGCACGTGAGCG
--TCACGTGACC-
 A C T G A T G C A C T G A G T C C G T A A G T C A C T G A C G T A C T G G T C A A C T G A G T C A C T G
A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCACGTGAGCG----
NTNNTNGTCACGTGACNNNTNC
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A G T C C G T A A G T C A C T G A C G T A C T G G T C A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C T A G G C A T C T G A A G C T C A G T T C A G T A C G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A G A T C A G C T T G A C G C A T C G A T G A T C G A T C

Mlxip/MA0622.1/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GCGCACGTGAGCG
--GCACGTGT---
 A C T G A T G C A C T G A G T C C G T A A G T C A C T G A C G T A C T G G T C A A C T G A G T C A C T G
A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GCGCACGTGAGCG-
--TCACGTGACCGG
 A C T G A T G C A C T G A G T C C G T A A G T C A C T G A C G T A C T G G T C A A C T G A G T C A C T G A C G T
A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GCGCACGTGAGCG
---CACGTG----
 A C T G A T G C A C T G A G T C C G T A A G T C A C T G A C G T A C T G G T C A A C T G A G T C A C T G
A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCGCACGTGAGCG--
TGACCACGTGGTCGGG
 A C G T A C T G A T G C A C T G A G T C C G T A A G T C A C T G A C G T A C T G G T C A A C T G A G T C A C T G A C G T A C G T
C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G