Information for 18-YTWCTCCWGTCCA (Motif 29)

A G C T A G C T G C T A A T G C A G C T A G T C G A T C C G T A C T A G A C G T A T G C A G T C G T C A
Reverse Opposite:
A C G T A C T G A T C G G T C A A G T C C G A T C A T G C T A G T C G A A T C G C G A T T C G A T C G A
p-value:1e-6
log p-value:-1.482e+01
Information Content per bp:1.699
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif186.1
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets40.5 +/- 19.0bp
Average Position of motif in Background51.0 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:YTWCTCCWGTCCA---
GAGCCCTTGTCCCTAA
 A G C T A G C T G C T A A T G C A G C T A G T C G A T C C G T A C T A G A C G T A T G C A G T C G T C A A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:YTWCTCCWGTCCA----
-GGCAAAAGTCCAATAA
 A G C T A G C T G C T A A T G C A G C T A G T C G A T C C G T A C T A G A C G T A T G C A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:YTWCTCCWGTCCA
-----GCTGTCAA
 A G C T A G C T G C T A A T G C A G C T A G T C G A T C C G T A C T A G A C G T A T G C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------YTWCTCCWGTCCA
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T G C T A A T G C A G C T A G T C G A T C C G T A C T A G A C G T A T G C A G T C G T C A
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.54
Offset:8
Orientation:forward strand
Alignment:YTWCTCCWGTCCA-
--------ATCCAC
 A G C T A G C T G C T A A T G C A G C T A G T C G A T C C G T A C T A G A C G T A T G C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:YTWCTCCWGTCCA
-----CCTGTCAA
 A G C T A G C T G C T A A T G C A G C T A G T C G A T C C G T A C T A G A C G T A T G C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:YTWCTCCWGTCCA
-TACACCTGTC--
 A G C T A G C T G C T A A T G C A G C T A G T C G A T C C G T A C T A G A C G T A T G C A G T C G T C A
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:YTWCTCCWGTCCA
TGACACCTGTCA-
 A G C T A G C T G C T A A T G C A G C T A G T C G A T C C G T A C T A G A C G T A T G C A G T C G T C A
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---YTWCTCCWGTCCA
GGGTTACTANAGGTCA
 A C G T A C G T A C G T A G C T A G C T G C T A A T G C A G C T A G T C G A T C C G T A C T A G A C G T A T G C A G T C G T C A
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:YTWCTCCWGTCCA---
------CTGTTCCTGG
 A G C T A G C T G C T A A T G C A G C T A G T C G A T C C G T A C T A G A C G T A T G C A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G