Information for 17-TCACGCSTGANGG (Motif 28)

A C G T A T G C G T C A A G T C C T A G A G T C A T C G A C G T C T A G C G T A A G T C A C T G A C T G
Reverse Opposite:
T A G C A G T C A C T G A C G T A G T C C G T A A T G C A C T G A G T C A C T G A C G T A T C G C G T A
p-value:1e-6
log p-value:-1.608e+01
Information Content per bp:1.787
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.3 +/- 17.2bp
Average Position of motif in Background47.5 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax6/MA0069.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCACGCSTGANGG
TTCACGCATGAGTT
 A C G T A C G T A T G C G T C A A G T C C T A G A G T C A T C G A C G T C T A G C G T A A G T C A C T G A C T G
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

PAX1/MA0779.1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TCACGCSTGANGG
NGCANTCATGCGTGACG-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A A G T C C T A G A G T C A T C G A C G T C T A G C G T A A G T C A C T G A C T G
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCACGCSTGANGG
TCACACCT-----
 A C G T A T G C G T C A A G T C C T A G A G T C A T C G A C G T C T A G C G T A A G T C A C T G A C T G
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCACGCSTGANGG
TCACACCT-----
 A C G T A T G C G T C A A G T C C T A G A G T C A T C G A C G T C T A G C G T A A G T C A C T G A C T G
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCACGCSTGANGG
TCACACCT-----
 A C G T A T G C G T C A A G T C C T A G A G T C A T C G A C G T C T A G C G T A A G T C A C T G A C T G
G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCACGCSTGANGG
TCACACCT-----
 A C G T A T G C G T C A A G T C C T A G A G T C A T C G A C G T C T A G C G T A A G T C A C T G A C T G
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:7
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TCACGCSTGANGG
TGCAGTCATGCGTGACG-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A A G T C C T A G A G T C A T C G A C G T C T A G C G T A A G T C A C T G A C T G
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCACGCSTGANGG
TCACACCT-----
 A C G T A T G C G T C A A G T C C T A G A G T C A T C G A C G T C T A G C G T A A G T C A C T G A C T G
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCACGCSTGANGG
TTTCACACCT-----
 A C G T A C G T A C G T A T G C G T C A A G T C C T A G A G T C A T C G A C G T C T A G C G T A A G T C A C T G A C T G
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCACGCSTGANGG
--NCACGTGACN-
 A C G T A T G C G T C A A G T C C T A G A G T C A T C G A C G T C T A G C G T A A G T C A C T G A C T G
A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T