Information for 16-RAAYTCCAAATWC (Motif 27)

C T G A C G T A C G T A A G T C A C G T A T G C A G T C C G T A C G T A C T G A A C G T C G A T A G T C
Reverse Opposite:
A C T G G C T A T G C A A G C T A C G T A C G T A C T G A T C G C G T A C T A G A C G T A C G T A G C T
p-value:1e-7
log p-value:-1.814e+01
Information Content per bp:1.811
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif45.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets39.7 +/- 26.0bp
Average Position of motif in Background55.6 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----RAAYTCCAAATWC
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A A G T C A C G T A T G C A G T C C G T A C G T A C T G A A C G T C G A T A G T C
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RAAYTCCAAATWC
GCATTCCAGN---
 C T G A C G T A C G T A A G T C A C G T A T G C A G T C C G T A C G T A C T G A A C G T C G A T A G T C
C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------RAAYTCCAAATWC
GGGGTCAAAGTCCAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A A G T C A C G T A T G C A G T C C G T A C G T A C T G A A C G T C G A T A G T C
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RAAYTCCAAATWC
CACATTCCAT----
 A C G T C T G A C G T A C G T A A G T C A C G T A T G C A G T C C G T A C G T A C T G A A C G T C G A T A G T C
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:RAAYTCCAAATWC
-ATATGCAAAT--
 C T G A C G T A C G T A A G T C A C G T A T G C A G T C C G T A C G T A C T G A A C G T C G A T A G T C
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RAAYTCCAAATWC-
-ATATGCAAATNNN
 C T G A C G T A C G T A A G T C A C G T A T G C A G T C C G T A C G T A C T G A A C G T C G A T A G T C A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RAAYTCCAAATWC
ACATTCCA-----
 C T G A C G T A C G T A A G T C A C G T A T G C A G T C C G T A C G T A C T G A A C G T C G A T A G T C
C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RAAYTCCAAATWC--
AGAGTCCAAAGTCCA
 C T G A C G T A C G T A A G T C A C G T A T G C A G T C C G T A C G T A C T G A A C G T C G A T A G T C A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RAAYTCCAAATWC--
CANAGNNCAAAGTCCA
 A C G T C T G A C G T A C G T A A G T C A C G T A T G C A G T C C G T A C G T A C T G A A C G T C G A T A G T C A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:RAAYTCCAAATWC
---TGCCAA----
 C T G A C G T A C G T A A G T C A C G T A T G C A G T C C G T A C G T A C T G A A C G T C G A T A G T C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T