Information for 9-RTYCTRGMCACCA (Motif 17)

C T G A A C G T A G C T A G T C A C G T C T A G A C T G G T A C A G T C C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T A C T G A C T G A G T C A G T C C G T A C T A G T C G A C G T A A G C T
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.4 +/- 21.0bp
Average Position of motif in Background47.0 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--RTYCTRGMCACCA
WCATTTTGKCCTCYT
 A C G T A C G T C T G A A C G T A G C T A G T C A C G T C T A G A C T G G T A C A G T C C G T A A G T C A G T C C G T A
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RTYCTRGMCACCA----
ATAAATGACACCTATCA
 C T G A A C G T A G C T A G T C A C G T C T A G A C T G G T A C A G T C C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:RTYCTRGMCACCA
-SCCTAGCAACAG
 C T G A A C G T A G C T A G T C A C G T C T A G A C T G G T A C A G T C C G T A A G T C A G T C C G T A
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---RTYCTRGMCACCA
TGTTKCCTAGCAACM-
 A C G T A C G T A C G T C T G A A C G T A G C T A G T C A C G T C T A G A C T G G T A C A G T C C G T A A G T C A G T C C G T A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RTYCTRGMCACCA
TTTCCTAGAAAGCA
 A C G T C T G A A C G T A G C T A G T C A C G T C T A G A C T G G T A C A G T C C G T A A G T C A G T C C G T A
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:RTYCTRGMCACCA
WDNCTGGGCA---
 C T G A A C G T A G C T A G T C A C G T C T A G A C T G G T A C A G T C C G T A A G T C A G T C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----RTYCTRGMCACCA
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T A C G T C T G A A C G T A G C T A G T C A C G T C T A G A C T G G T A C A G T C C G T A A G T C A G T C C G T A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:RTYCTRGMCACCA
CGTCTAGACA---
 C T G A A C G T A G C T A G T C A C G T C T A G A C T G G T A C A G T C C G T A A G T C A G T C C G T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-RTYCTRGMCACCA-
TACCCTAGTTACCGA
 A C G T C T G A A C G T A G C T A G T C A C G T C T A G A C T G G T A C A G T C C G T A A G T C A G T C C G T A A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----RTYCTRGMCACCA
BCNGGTTCTAGANCN--
 A C G T A C G T A C G T A C G T C T G A A C G T A G C T A G T C A C G T C T A G A C T G G T A C A G T C C G T A A G T C A G T C C G T A
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T A C G T