Information for 7-TAARCCAGRVTGTYAA (Motif 10)

C A G T C T G A C G T A C T G A A G T C A G T C C G T A C T A G C T A G T C A G A C G T A C T G C A G T A G T C C G T A T G C A
Reverse Opposite:
A C G T C G A T T C A G G T C A G T A C G T C A A G C T A G T C A G T C A C G T A C T G A C T G A G C T A C G T A G C T G T C A
p-value:1e-12
log p-value:-2.834e+01
Information Content per bp:1.751
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.5 +/- 25.6bp
Average Position of motif in Background59.7 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAARCCAGRVTGTYAA
-ATGCCAGACN-----
 C A G T C T G A C G T A C T G A A G T C A G T C C G T A C T A G C T A G T C A G A C G T A C T G C A G T A G T C C G T A T G C A
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAARCCAGRVTGTYAA
ATAATCCC---------
 A C G T C A G T C T G A C G T A C T G A A G T C A G T C C G T A C T A G C T A G T C A G A C G T A C T G C A G T A G T C C G T A T G C A
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TAARCCAGRVTGTYAA
TAATCCCN--------
 C A G T C T G A C G T A C T G A A G T C A G T C C G T A C T A G C T A G T C A G A C G T A C T G C A G T A G T C C G T A T G C A
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TAARCCAGRVTGTYAA
------AAGGTGTKAA
 C A G T C T G A C G T A C T G A A G T C A G T C C G T A C T A G C T A G T C A G A C G T A C T G C A G T A G T C C G T A T G C A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TAARCCAGRVTGTYAA
---ANCAGGATGT---
 C A G T C T G A C G T A C T G A A G T C A G T C C G T A C T A G C T A G T C A G A C G T A C T G C A G T A G T C C G T A T G C A
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TAARCCAGRVTGTYAA
GCTAATCC----------
 A C G T A C G T C A G T C T G A C G T A C T G A A G T C A G T C C G T A C T A G C T A G T C A G A C G T A C T G C A G T A G T C C G T A T G C A
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TAARCCAGRVTGTYAA
CTTAATCCC---------
 A C G T A C G T C A G T C T G A C G T A C T G A A G T C A G T C C G T A C T A G C T A G T C A G A C G T A C T G C A G T A G T C C G T A T G C A
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TAARCCAGRVTGTYAA
TTAATCCC---------
 A C G T C A G T C T G A C G T A C T G A A G T C A G T C C G T A C T A G C T A G T C A G A C G T A C T G C A G T A G T C C G T A T G C A
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TAARCCAGRVTGTYAA
-AAACCACANN-----
 C A G T C T G A C G T A C T G A A G T C A G T C C G T A C T A G C T A G T C A G A C G T A C T G C A G T A G T C C G T A T G C A
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TAARCCAGRVTGTYAA
-AAACCACAGAN----
 C A G T C T G A C G T A C T G A A G T C A G T C C G T A C T A G C T A G T C A G A C G T A C T G C A G T A G T C C G T A T G C A
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T