Information for 1-KGKMAGAMAGGGAGSM (Motif 1)

C A G T A C T G A C T G G T A C C G T A C T A G C G T A T G C A C G T A A C T G A C T G A C T G C G T A A C T G T A C G T G C A
Reverse Opposite:
A C G T A T G C A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G G T A C A G T C G T C A
p-value:1e-16
log p-value:-3.876e+01
Information Content per bp:1.842
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.3 +/- 25.1bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:KGKMAGAMAGGGAGSM---
-GGAAGGAAGGAAGGAAGG
 C A G T A C T G A C T G G T A C C G T A C T A G C G T A T G C A C G T A A C T G A C T G A C T G C G T A A C T G T A C G T G C A A C G T A C G T A C G T
A C G T A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:9
Orientation:reverse strand
Alignment:KGKMAGAMAGGGAGSM---
---------GGGAGGACNG
 C A G T A C T G A C T G G T A C C G T A C T A G C G T A T G C A C G T A A C T G A C T G A C T G C G T A A C T G T A C G T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---KGKMAGAMAGGGAGSM
AGGTGNCAGACAG------
 A C G T A C G T A C G T C A G T A C T G A C T G G T A C C G T A C T A G C G T A T G C A C G T A A C T G A C T G A C T G C G T A A C T G T A C G T G C A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:KGKMAGAMAGGGAGSM
---------CGGAGC-
 C A G T A C T G A C T G G T A C C G T A C T A G C G T A T G C A C G T A A C T G A C T G A C T G C G T A A C T G T A C G T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:KGKMAGAMAGGGAGSM
-----AACAGGAAGT-
 C A G T A C T G A C T G G T A C C G T A C T A G C G T A T G C A C G T A A C T G A C T G A C T G C G T A A C T G T A C G T G C A
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---KGKMAGAMAGGGAGSM
AGGTGHCAGACA-------
 A C G T A C G T A C G T C A G T A C T G A C T G G T A C C G T A C T A G C G T A T G C A C G T A A C T G A C T G A C T G C G T A A C T G T A C G T G C A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:KGKMAGAMAGGGAGSM
--GGAGAAAGGTGCGA
 C A G T A C T G A C T G G T A C C G T A C T A G C G T A T G C A C G T A A C T G A C T G A C T G C G T A A C T G T A C G T G C A
A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:KGKMAGAMAGGGAGSM
-GGAACAAAGR-----
 C A G T A C T G A C T G G T A C C G T A C T A G C G T A T G C A C G T A A C T G A C T G A C T G C G T A A C T G T A C G T G C A
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:KGKMAGAMAGGGAGSM
---AACAAAGG-----
 C A G T A C T G A C T G G T A C C G T A C T A G C G T A T G C A C G T A A C T G A C T G A C T G C G T A A C T G T A C G T G C A
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:KGKMAGAMAGGGAGSM
------ACAGGAAGTG
 C A G T A C T G A C T G G T A C C G T A C T A G C G T A T G C A C G T A A C T G A C T G A C T G C G T A A C T G T A C G T G C A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G