Information for 6-CACACATGTATGC (Motif 7)

A G T C C G T A A G T C C G T A A G T C C G T A C G A T A C T G G C A T C T G A A C G T A C T G G T A C
Reverse Opposite:
C A T G A G T C C G T A A G C T C G T A G T A C C G T A A C G T A C T G A C G T C T A G C G A T C T A G
p-value:1e-14
log p-value:-3.253e+01
Information Content per bp:1.808
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif17.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.0 +/- 25.1bp
Average Position of motif in Background44.3 +/- 42.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX9/MA0781.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACACATGTATGC-
CGTCACGCATGACTGCA
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G A T A C T G G C A T C T G A A C G T A C T G G T A C A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CACACATGTATGC
AGCGGCACACACGCAA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G A T A C T G G C A T C T G A A C G T A C T G G T A C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T

T/MA0009.2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACACATGTATGC--
TCACACCTAGGTGTGA
 A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G A T A C T G G C A T C T G A A C G T A C T G G T A C A C G T A C G T
G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CACACATGTATGC-
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G A T A C T G G C A T C T G A A C G T A C T G G T A C A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PAX1/MA0779.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CACACATGTATGC-
CGTCACGCATGACTGCA
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G A T A C T G G C A T C T G A A C G T A C T G G T A C A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CACACATGTATGC
CCTCACCTG-----
 A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G A T A C T G G C A T C T G A A C G T A C T G G T A C
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACACATGTATGC
NNTNTCATGAATGT
 A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G A T A C T G G C A T C T G A A C G T A C T G G T A C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

TBX19/MA0804.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CACACATGTATGC----
TTTCACACCTAGGTGTGAAN
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G A T A C T G G C A T C T G A A C G T A C T G G T A C A C G T A C G T A C G T A C G T
C G A T C G A T G A C T T G A C C T G A G A T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T T C A G G A C T A C T G C T G A G T C A G C T A

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACACATGTATGC
NACATATGGN---
 A G T C C G T A A G T C C G T A A G T C C G T A C G A T A C T G G C A T C T G A A C G T A C T G G T A C
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACACATGTATGC-
SCAGYCADGCATGAC
 A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G A T A C T G G C A T C T G A A C G T A C T G G T A C A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C