Information for 20-TGCGTCCAYGTGACAT (Motif 38)

A C G T A T C G A G T C T C A G C G A T A G T C A G T C G T C A A G C T A T C G A C G T C T A G C T G A A G T C C G T A A C G T
Reverse Opposite:
T C G A G C A T A C T G A G C T A G T C C G T A A T G C C T G A A C G T A C T G C T A G C G T A A G T C A C T G T A G C G T C A
p-value:1e-6
log p-value:-1.551e+01
Information Content per bp:1.754
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.7 +/- 25.4bp
Average Position of motif in Background57.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TGCGTCCAYGTGACAT
----KCCACGTGAC--
 A C G T A T C G A G T C T C A G C G A T A G T C A G T C G T C A A G C T A T C G A C G T C T A G C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TGCGTCCAYGTGACAT
----GCCACGTGACC-
 A C G T A T C G A G T C T C A G C G A T A G T C A G T C G T C A A G C T A T C G A C G T C T A G C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TGCGTCCAYGTGACAT
----RTCATGTGAC--
 A C G T A T C G A G T C T C A G C G A T A G T C A G T C G T C A A G C T A T C G A C G T C T A G C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TGCGTCCAYGTGACAT
----ACCACGTGAC--
 A C G T A T C G A G T C T C A G C G A T A G T C A G T C G T C A A G C T A T C G A C G T C T A G C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TGCGTCCAYGTGACAT
----GTCATGTGACC-
 A C G T A T C G A G T C T C A G C G A T A G T C A G T C G T C A A G C T A T C G A C G T C T A G C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TGCGTCCAYGTGACAT
-----NCACGTGACN-
 A C G T A T C G A G T C T C A G C G A T A G T C A G T C G T C A A G C T A T C G A C G T C T A G C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:7
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TGCGTCCAYGTGACAT
-----NCACGTGACN-
 A C G T A T C G A G T C T C A G C G A T A G T C A G T C G T C A A G C T A T C G A C G T C T A G C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TGCGTCCAYGTGACAT
-----TCACGTGACC-
 A C G T A T C G A G T C T C A G C G A T A G T C A G T C G T C A A G C T A T C G A C G T C T A G C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TGCGTCCAYGTGACAT-
-----TCACGTGACCGG
 A C G T A T C G A G T C T C A G C G A T A G T C A G T C G T C A A G C T A T C G A C G T C T A G C T G A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

TFEB/MA0692.1/Jaspar

Match Rank:10
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TGCGTCCAYGTGACAT
----ATCACGTGAC--
 A C G T A T C G A G T C T C A G C G A T A G T C A G T C G T C A A G C T A T C G A C G T C T A G C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T