Information for 13-CCATTAGTGT (Motif 37)

A G T C A G T C C G T A A C G T A G C T C G T A A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C A C G T C T G A C G T A C G A T A C T G C T A G
p-value:1e-6
log p-value:-1.583e+01
Information Content per bp:1.927
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif25.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.3 +/- 20.3bp
Average Position of motif in Background46.1 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCATTAGTGT
-AATTAGTG-
 A G T C A G T C C G T A A C G T A G C T C G T A A C T G A C G T A C T G A C G T
A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCATTAGTGT
BCMATTAG---
 A C G T A G T C A G T C C G T A A C G T A G C T C G T A A C T G A C G T A C T G A C G T
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCATTAGTGT
GCAATTAG---
 A C G T A G T C A G T C C G T A A C G T A G C T C G T A A C T G A C G T A C T G A C G T
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCATTAGTGT
ACCGATTAG---
 A C G T A C G T A G T C A G T C C G T A A C G T A G C T C G T A A C T G A C G T A C T G A C G T
C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCATTAGTGT
AAACMATTAN---
 A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G C T C G T A A C T G A C G T A C T G A C G T
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCATTAGTGT
CCAATTAA---
 A C G T A G T C A G T C C G T A A C G T A G C T C G T A A C T G A C G T A C T G A C G T
T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCATTAGTGT
ACTAATTAGC--
 A C G T A C G T A G T C A G T C C G T A A C G T A G C T C G T A A C T G A C G T A C T G A C G T
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T

PDX1/MA0132.2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCATTAGTGT
GTAATTAG---
 A C G T A G T C A G T C C G T A A C G T A G C T C G T A A C T G A C G T A C T G A C G T
T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCATTAGTGT
AAAAACCATTAAGG-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G C T C G T A A C T G A C G T A C T G A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCATTAGTGT
NNCAATTANN--
 A C G T A C G T A G T C A G T C C G T A A C G T A G C T C G T A A C T G A C G T A C T G A C G T
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T