Information for 21-GTCCAGGGACASA (Motif 35)

A T C G A G C T G T A C G T A C C G T A T C A G A C T G A T C G C G T A A G T C G T C A A T C G C G T A
Reverse Opposite:
C G A T T A G C C A G T A C T G A C G T A T G C G T A C A G T C C G A T A C T G A C T G C T G A A T G C
p-value:1e-7
log p-value:-1.713e+01
Information Content per bp:1.739
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif43.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets71.8 +/- 16.3bp
Average Position of motif in Background53.3 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GTCCAGGGACASA
--CCAGGAACAG-
 A T C G A G C T G T A C G T A C C G T A T C A G A C T G A T C G C G T A A G T C G T C A A T C G C G T A
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTCCAGGGACASA
---CAAGGHCANV
 A T C G A G C T G T A C G T A C C G T A T C A G A C T G A T C G C G T A A G T C G T C A A T C G C G T A
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTCCAGGGACASA
-NTCAAGGTCA--
 A T C G A G C T G T A C G T A C C G T A T C A G A C T G A T C G C G T A A G T C G T C A A T C G C G T A
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCCAGGGACASA
CCGCCCAAGGGCAG-
 A C G T A C G T A T C G A G C T G T A C G T A C C G T A T C A G A C T G A T C G C G T A A G T C G T C A A T C G C G T A
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTCCAGGGACASA-----
--CGAAGCACACAAAATA
 A T C G A G C T G T A C G T A C C G T A T C A G A C T G A T C G C G T A A G T C G T C A A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCCAGGGACASA
-BTCAAGGTCA--
 A T C G A G C T G T A C G T A C C G T A T C A G A C T G A T C G C G T A A G T C G T C A A T C G C G T A
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTCCAGGGACASA
AAGTTCAAGGTCAGC
 A C G T A C G T A T C G A G C T G T A C G T A C C G T A T C A G A C T G A T C G C G T A A G T C G T C A A T C G C G T A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCCAGGGACASA
TGCCCAGNHW----
 A C G T A T C G A G C T G T A C G T A C C G T A T C A G A C T G A T C G C G T A A G T C G T C A A T C G C G T A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTCCAGGGACASA-
TGACCCAGTGACCTAC
 A C G T A C G T A T C G A G C T G T A C G T A C C G T A T C A G A C T G A T C G C G T A A G T C G T C A A T C G C G T A A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTCCAGGGACASA
RTCATGTGAC---
 A T C G A G C T G T A C G T A C C G T A T C A G A C T G A T C G C G T A A G T C G T C A A T C G C G T A
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T