Information for 12-CAAGCATCGC (Motif 34)

A G T C C G T A C T G A C T A G A G T C G T C A A C G T A G T C T C A G A G T C
Reverse Opposite:
C T A G A G T C A C T G G T C A A C G T A C T G A G T C A G C T A C G T C T A G
p-value:1e-8
log p-value:-1.891e+01
Information Content per bp:1.861
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif24.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets44.0 +/- 19.0bp
Average Position of motif in Background51.2 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAAGCATCGC
CAAGCTT---
 A G T C C G T A C T G A C T A G A G T C G T C A A C G T A G T C T C A G A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAGCATCGC
CCAATCAA---
 A C G T A G T C C G T A C T G A C T A G A G T C G T C A A C G T A G T C T C A G A G T C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAAGCATCGC
CACGCA----
 A G T C C G T A C T G A C T A G A G T C G T C A A C G T A G T C T C A G A G T C
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAAGCATCGC---
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G T C C G T A C T G A C T A G A G T C G T C A A C G T A G T C T C A G A G T C A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAAGCATCGC---
GTCATGCHTGRCTGS
 A C G T A C G T A G T C C G T A C T G A C T A G A G T C G T C A A C G T A G T C T C A G A G T C A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAAGCATCGC
TBGCACGCAA---
 A C G T A C G T A C G T A G T C C G T A C T G A C T A G A G T C G T C A A C G T A G T C T C A G A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAAGCATCGC----
CAGGCCNNGGCCNN
 A G T C C G T A C T G A C T A G A G T C G T C A A C G T A G T C T C A G A G T C A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZBTB33/MA0527.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAAGCATCGC-----
NAGNTCTCGCGAGAN
 A G T C C G T A C T G A C T A G A G T C G T C A A C G T A G T C T C A G A G T C A C G T A C G T A C G T A C G T A C G T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAAGCATCGC-------
TAAGCCACGCCCCCTTT
 A G T C C G T A C T G A C T A G A G T C G T C A A C G T A G T C T C A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAAGCATCGC
AAATCACTGC
 A G T C C G T A C T G A C T A G A G T C G T C A A C G T A G T C T C A G A G T C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C