Information for 19-CAGGGSAGGBCAGTGA (Motif 33)

G T A C G C T A A C T G T C A G A C T G A T G C C G T A C T A G A C T G A G T C A G T C C G T A A T C G A C G T A T C G C T G A
Reverse Opposite:
A G C T A T G C C G T A A T G C G C A T C T A G T A C G A G T C A G T C C G A T A T C G A G T C A G T C G T A C C G A T A C T G
p-value:1e-8
log p-value:-1.926e+01
Information Content per bp:1.751
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets63.2 +/- 22.7bp
Average Position of motif in Background50.3 +/- 38.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CAGGGSAGGBCAGTGA---
-----NAGGTCANTGACCT
 G T A C G C T A A C T G T C A G A C T G A T G C C G T A C T A G A C T G A G T C A G T C C G T A A T C G A C G T A T C G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAGGGSAGGBCAGTGA
WDNCTGGGCA---------
 A C G T A C G T A C G T G T A C G C T A A C T G T C A G A C T G A T G C C G T A C T A G A C T G A G T C A G T C C G T A A T C G A C G T A T C G C T G A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGSAGGBCAGTGA
NNTNAGGGGCGGNNNN---
 A C G T A C G T A C G T G T A C G C T A A C T G T C A G A C T G A T G C C G T A C T A G A C T G A G T C A G T C C G T A A T C G A C G T A T C G C T G A
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CAGGGSAGGBCAGTGA
-----AAGGCAAGTGT
 G T A C G C T A A C T G T C A G A C T G A T G C C G T A C T A G A C T G A G T C A G T C C G T A A T C G A C G T A T C G C T G A
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAGGGSAGGBCAGTGA
-GGGGCTYGKCTGGGA
 G T A C G C T A A C T G T C A G A C T G A T G C C G T A C T A G A C T G A G T C A G T C C G T A A T C G A C G T A T C G C T G A
A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAGGGSAGGBCAGTGA
TGGGGAAGGGCM----
 G T A C G C T A A C T G T C A G A C T G A T G C C G T A C T A G A C T G A G T C A G T C C G T A A T C G A C G T A T C G C T G A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CAGGGSAGGBCAGTGA----
----GTAGGTCACTGGGTCA
 G T A C G C T A A C T G T C A G A C T G A T G C C G T A C T A G A C T G A G T C A G T C C G T A A T C G A C G T A T C G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CAGGGSAGGBCAGTGA
-TGGGGA---------
 G T A C G C T A A C T G T C A G A C T G A T G C C G T A C T A G A C T G A G T C A G T C C G T A A T C G A C G T A T C G C T G A
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CAGGGSAGGBCAGTGA
CACAGCAGGGGG----
 G T A C G C T A A C T G T C A G A C T G A T G C C G T A C T A G A C T G A G T C A G T C C G T A A T C G A C G T A T C G C T G A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CAGGGSAGGBCAGTGA
CCACACAGCAGGAGA----
 A C G T A C G T A C G T G T A C G C T A A C T G T C A G A C T G A T G C C G T A C T A G A C T G A G T C A G T C C G T A A T C G A C G T A T C G C T G A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T